Protein–RNA interactions for Protein: P38854

TDA11, Topoisomerase I damage affected protein 11, yeastyeast

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA11P38854 YHR112CYHR112C 1137 nt4.02□□□□□ -1.77
TDA11P38854 YIL165CYIL165C 360 nt4.02□□□□□ -1.77
TDA11P38854 YPL278CYPL278C 303 nt4.02□□□□□ -1.77
TDA11P38854 OM14YBR230C 405 nt4.02□□□□□ -1.77
TDA11P38854 MEF2YJL102W 2460 nt4.02□□□□□ -1.77
TDA11P38854 RXT3YDL076C 885 nt4.01□□□□□ -1.77
TDA11P38854 DAS2YDR020C 699 nt4.01□□□□□ -1.77
TDA11P38854 YER145C-AYER145C-A 438 nt4.01□□□□□ -1.77
TDA11P38854 TIM21YGR033C 720 nt4.01□□□□□ -1.77
TDA11P38854 RFC2YJR068W 1062 nt4.01□□□□□ -1.77
TDA11P38854 YMR114CYMR114C 1107 nt4.01□□□□□ -1.77
TDA11P38854 COA2YPL189C-A 207 nt4.01□□□□□ -1.77
TDA11P38854 SPO77YLR341W 1434 nt4.01□□□□□ -1.77
TDA11P38854 ELM1YKL048C 1923 nt4.01□□□□□ -1.77
TDA11P38854 RGP1YDR137W 1992 nt4□□□□□ -1.77
TDA11P38854 POL12YBL035C 2118 nt4□□□□□ -1.77
TDA11P38854 RPP1AYDL081C 321 nt4□□□□□ -1.77
TDA11P38854 MRS3YJL133W 945 nt4□□□□□ -1.77
TDA11P38854 FYV5YCL058C 459 nt4□□□□□ -1.77
TDA11P38854 SUL2YLR092W 2682 nt4□□□□□ -1.77
TDA11P38854 MCM7YBR202W 2538 nt3.99□□□□□ -1.77
TDA11P38854 RKM4YDR257C 1485 nt3.99□□□□□ -1.77
TDA11P38854 IKS1YJL057C 2004 nt3.99□□□□□ -1.77
TDA11P38854 VMA22YHR060W 546 nt3.99□□□□□ -1.77
TDA11P38854 AIR1YIL079C 1083 nt3.99□□□□□ -1.77
TDA11P38854 SOP4YJL192C 705 nt3.99□□□□□ -1.77
TDA11P38854 YJR112W-AYJR112W-A 330 nt3.99□□□□□ -1.77
TDA11P38854 PSR1YLL010C 1284 nt3.99□□□□□ -1.77
TDA11P38854 RRN9YMR270C 1098 nt3.99□□□□□ -1.77
TDA11P38854 PRE2YPR103W 864 nt3.99□□□□□ -1.77
TDA11P38854 YBR219CYBR219C 384 nt3.99□□□□□ -1.77
TDA11P38854 YDR444WYDR444W 2064 nt3.99□□□□□ -1.77
TDA11P38854 ACE2YLR131C 2313 nt3.99□□□□□ -1.77
TDA11P38854 ECM16YMR128W 3804 nt3.99□□□□□ -1.77
TDA11P38854 KEX1YGL203C 2190 nt3.99□□□□□ -1.77
TDA11P38854 VPS45YGL095C 1734 nt3.98□□□□□ -1.77
TDA11P38854 MTC4YBR255W 2085 nt3.98□□□□□ -1.77
TDA11P38854 RPS13YDR064W 456 nt3.98□□□□□ -1.77
TDA11P38854 SNO1YMR095C 675 nt3.98□□□□□ -1.77
TDA11P38854 RPL18BYNL301C 561 nt3.98□□□□□ -1.77
TDA11P38854 RPS19AYOL121C 435 nt3.98□□□□□ -1.77
TDA11P38854 ENT1YDL161W 1365 nt3.98□□□□□ -1.77
TDA11P38854 TYW1YPL207W 2433 nt3.97□□□□□ -1.77
TDA11P38854 CLD1YGR110W 1338 nt3.97□□□□□ -1.77
TDA11P38854 PFK1YGR240C 2964 nt3.97□□□□□ -1.77
TDA11P38854 DHH1YDL160C 1521 nt3.97□□□□□ -1.77
TDA11P38854 TAF12YDR145W 1620 nt3.97□□□□□ -1.77
TDA11P38854 YFT2YDR319C 825 nt3.97□□□□□ -1.77
TDA11P38854 YOR034C-AYOR034C-A 243 nt3.97□□□□□ -1.77
TDA11P38854 PNG1YPL096W 1092 nt3.97□□□□□ -1.77
TDA11P38854 SPN1YPR133C 1233 nt3.97□□□□□ -1.77
TDA11P38854 PMT4YJR143C 2289 nt3.97□□□□□ -1.77
TDA11P38854 FRT2YAL028W 1587 nt3.97□□□□□ -1.77
TDA11P38854 YOR022CYOR022C 2148 nt3.97□□□□□ -1.77
TDA11P38854 GAS2YLR343W 1668 nt3.97□□□□□ -1.77
TDA11P38854 MDM30YLR368W 1797 nt3.97□□□□□ -1.77
TDA11P38854 YER076CYER076C 909 nt3.96□□□□□ -1.78
TDA11P38854 YGL088WYGL088W 366 nt3.96□□□□□ -1.78
TDA11P38854 YGL108CYGL108C 423 nt3.96□□□□□ -1.78
TDA11P38854 MRPL20YKR085C 588 nt3.96□□□□□ -1.78
TDA11P38854 RPS1BYML063W 768 nt3.96□□□□□ -1.78
TDA11P38854 ASC1YMR116C 960 nt3.96□□□□□ -1.78
TDA11P38854 YPR015CYPR015C 744 nt3.96□□□□□ -1.78
TDA11P38854 HOM3YER052C 1584 nt3.96□□□□□ -1.78
TDA11P38854 SPT6YGR116W 4356 nt3.96□□□□□ -1.78
TDA11P38854 OAF1YAL051W 3144 nt3.96□□□□□ -1.78
TDA11P38854 MET12YPL023C 1974 nt3.96□□□□□ -1.78
TDA11P38854 TFA1YKL028W 1449 nt3.95□□□□□ -1.78
TDA11P38854 tL(UAG)JtL(UAG)J 82 nt3.95□□□□□ -1.78
TDA11P38854 tL(UAG)L1tL(UAG)L1 82 nt3.95□□□□□ -1.78
TDA11P38854 tL(UAG)L2tL(UAG)L2 82 nt3.95□□□□□ -1.78
TDA11P38854 RTA1YGR213C 954 nt3.95□□□□□ -1.78
TDA11P38854 YLR154W-BYLR154W-B 165 nt3.95□□□□□ -1.78
TDA11P38854 NUP159YIL115C 4383 nt3.95□□□□□ -1.78
TDA11P38854 CHL1YPL008W 2586 nt3.95□□□□□ -1.78
TDA11P38854 GPI10YGL142C 1851 nt3.94□□□□□ -1.78
TDA11P38854 FLO8YER109C 2400 nt3.94□□□□□ -1.78
TDA11P38854 GWT1YJL091C 1473 nt3.94□□□□□ -1.78
TDA11P38854 ELO2YCR034W 1044 nt3.94□□□□□ -1.78
TDA11P38854 YDR526CYDR526C 471 nt3.94□□□□□ -1.78
TDA11P38854 UBC8YEL012W 657 nt3.94□□□□□ -1.78
TDA11P38854 YFR045WYFR045W 930 nt3.94□□□□□ -1.78
TDA11P38854 YGL193CYGL193C 312 nt3.94□□□□□ -1.78
TDA11P38854 MRP4YHL004W 1185 nt3.94□□□□□ -1.78
TDA11P38854 YIL014C-AYIL014C-A 315 nt3.94□□□□□ -1.78
TDA11P38854 CNB1YKL190W 528 nt3.94□□□□□ -1.78
TDA11P38854 YLR157W-DYLR157W-D 213 nt3.94□□□□□ -1.78
TDA11P38854 YMR130WYMR130W 909 nt3.94□□□□□ -1.78
TDA11P38854 AST1YBL069W 1290 nt3.94□□□□□ -1.78
TDA11P38854 YNL181WYNL181W 1224 nt3.94□□□□□ -1.78
TDA11P38854 YPR003CYPR003C 2265 nt3.94□□□□□ -1.78
TDA11P38854 IDS2YJL146W 1410 nt3.94□□□□□ -1.78
TDA11P38854 RIM4YHL024W 2142 nt3.94□□□□□ -1.78
TDA11P38854 KTR7YIL085C 1554 nt3.93□□□□□ -1.78
TDA11P38854 OAR1YKL055C 837 nt3.93□□□□□ -1.78
TDA11P38854 YKR047WYKR047W 306 nt3.93□□□□□ -1.78
TDA11P38854 NKP2YLR315W 462 nt3.93□□□□□ -1.78
TDA11P38854 REX4YOL080C 870 nt3.93□□□□□ -1.78
TDA11P38854 PRM2YIL037C 1971 nt3.93□□□□□ -1.78
TDA11P38854 RTC1YOL138C 4026 nt3.92□□□□□ -1.78
Retrieved 100 of 7,029 protein–RNA pairs in 15.7 ms