Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
BdnfP21237 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BdnfP21237 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
BdnfP21237 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
BdnfP21237 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BdnfP21237 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
BdnfP21237 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BdnfP21237 Gm5812-201ENSMUST00000061073 957 ntBASIC18.84■□□□□ 0.61
BdnfP21237 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BdnfP21237 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
BdnfP21237 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
BdnfP21237 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
BdnfP21237 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
BdnfP21237 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
BdnfP21237 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
BdnfP21237 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
BdnfP21237 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
BdnfP21237 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
BdnfP21237 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.83■□□□□ 0.6
BdnfP21237 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.83■□□□□ 0.6
BdnfP21237 Gm42501-201ENSMUST00000200220 1026 ntBASIC18.83■□□□□ 0.6
BdnfP21237 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
BdnfP21237 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.83■□□□□ 0.6
BdnfP21237 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
BdnfP21237 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
BdnfP21237 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
BdnfP21237 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
BdnfP21237 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
BdnfP21237 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
BdnfP21237 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
BdnfP21237 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BdnfP21237 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
BdnfP21237 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BdnfP21237 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BdnfP21237 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BdnfP21237 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BdnfP21237 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BdnfP21237 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BdnfP21237 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
BdnfP21237 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BdnfP21237 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
BdnfP21237 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
BdnfP21237 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BdnfP21237 Gm7143-201ENSMUST00000222811 859 ntBASIC18.81■□□□□ 0.6
BdnfP21237 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BdnfP21237 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BdnfP21237 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BdnfP21237 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BdnfP21237 Golph3-205ENSMUST00000228671 2842 ntBASIC18.8■□□□□ 0.6
BdnfP21237 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
BdnfP21237 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BdnfP21237 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BdnfP21237 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.8■□□□□ 0.6
BdnfP21237 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BdnfP21237 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BdnfP21237 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BdnfP21237 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
BdnfP21237 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BdnfP21237 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BdnfP21237 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
BdnfP21237 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BdnfP21237 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
BdnfP21237 Gm15546-201ENSMUST00000122095 826 ntBASIC18.79■□□□□ 0.6
BdnfP21237 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BdnfP21237 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
BdnfP21237 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
BdnfP21237 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
BdnfP21237 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
BdnfP21237 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BdnfP21237 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BdnfP21237 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
BdnfP21237 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
BdnfP21237 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BdnfP21237 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BdnfP21237 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
BdnfP21237 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BdnfP21237 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
BdnfP21237 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BdnfP21237 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.77■□□□□ 0.6
BdnfP21237 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BdnfP21237 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BdnfP21237 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
BdnfP21237 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BdnfP21237 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
BdnfP21237 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BdnfP21237 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BdnfP21237 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
BdnfP21237 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.76■□□□□ 0.59
BdnfP21237 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
BdnfP21237 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BdnfP21237 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BdnfP21237 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
BdnfP21237 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
BdnfP21237 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
BdnfP21237 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
BdnfP21237 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BdnfP21237 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BdnfP21237 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BdnfP21237 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BdnfP21237 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms