Protein–RNA interactions for Protein: P12399

Ctla2a, Protein CTLA-2-alpha, mousemouse

Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctla2aP12399 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ctla2aP12399 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC17.74■□□□□ 0.43
Ctla2aP12399 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC17.74■□□□□ 0.43
Ctla2aP12399 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ctla2aP12399 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ctla2aP12399 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Ctla2aP12399 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ctla2aP12399 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Ctla2aP12399 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ctla2aP12399 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ctla2aP12399 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ctla2aP12399 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ctla2aP12399 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.73■□□□□ 0.43
Ctla2aP12399 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC17.73■□□□□ 0.43
Ctla2aP12399 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ctla2aP12399 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ctla2aP12399 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ctla2aP12399 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Ctla2aP12399 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ctla2aP12399 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ctla2aP12399 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ctla2aP12399 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ctla2aP12399 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ctla2aP12399 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ctla2aP12399 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ctla2aP12399 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.72■□□□□ 0.43
Ctla2aP12399 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ctla2aP12399 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC17.72■□□□□ 0.43
Ctla2aP12399 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC17.72■□□□□ 0.43
Ctla2aP12399 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ctla2aP12399 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ctla2aP12399 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ctla2aP12399 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ctla2aP12399 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
Ctla2aP12399 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.71■□□□□ 0.43
Ctla2aP12399 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ctla2aP12399 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ctla2aP12399 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ctla2aP12399 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ctla2aP12399 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ctla2aP12399 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ctla2aP12399 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ctla2aP12399 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ctla2aP12399 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ctla2aP12399 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Ctla2aP12399 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ctla2aP12399 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ctla2aP12399 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ctla2aP12399 AC151971.4-201ENSMUST00000214717 704 ntBASIC17.7■□□□□ 0.42
Ctla2aP12399 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ctla2aP12399 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ctla2aP12399 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ctla2aP12399 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ctla2aP12399 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Ctla2aP12399 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ctla2aP12399 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ctla2aP12399 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ctla2aP12399 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ctla2aP12399 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ctla2aP12399 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ctla2aP12399 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ctla2aP12399 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Ctla2aP12399 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ctla2aP12399 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ctla2aP12399 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ctla2aP12399 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ctla2aP12399 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ctla2aP12399 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Ctla2aP12399 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Ctla2aP12399 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ctla2aP12399 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ctla2aP12399 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ctla2aP12399 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ctla2aP12399 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Ctla2aP12399 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Ctla2aP12399 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ctla2aP12399 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ctla2aP12399 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ctla2aP12399 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC17.68■□□□□ 0.42
Ctla2aP12399 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ctla2aP12399 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ctla2aP12399 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.68■□□□□ 0.42
Ctla2aP12399 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ctla2aP12399 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ctla2aP12399 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ctla2aP12399 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ctla2aP12399 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ctla2aP12399 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ctla2aP12399 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ctla2aP12399 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Ctla2aP12399 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Ctla2aP12399 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Ctla2aP12399 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ctla2aP12399 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ctla2aP12399 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ctla2aP12399 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ctla2aP12399 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ctla2aP12399 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Ctla2aP12399 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ctla2aP12399 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms