Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smim1P0C8K7 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smim1P0C8K7 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Smim1P0C8K7 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC13.63□□□□□ -0.23
Smim1P0C8K7 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Smim1P0C8K7 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smim1P0C8K7 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smim1P0C8K7 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC13.63□□□□□ -0.23
Smim1P0C8K7 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Smim1P0C8K7 Gm6802-201ENSMUST00000167843 1983 ntBASIC13.63□□□□□ -0.23
Smim1P0C8K7 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Smim1P0C8K7 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Smim1P0C8K7 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Smim1P0C8K7 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smim1P0C8K7 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smim1P0C8K7 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smim1P0C8K7 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smim1P0C8K7 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Smim1P0C8K7 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC13.62□□□□□ -0.23
Smim1P0C8K7 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smim1P0C8K7 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smim1P0C8K7 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smim1P0C8K7 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Smim1P0C8K7 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smim1P0C8K7 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Smim1P0C8K7 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smim1P0C8K7 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smim1P0C8K7 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Smim1P0C8K7 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smim1P0C8K7 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smim1P0C8K7 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smim1P0C8K7 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smim1P0C8K7 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smim1P0C8K7 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smim1P0C8K7 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Smim1P0C8K7 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC13.61□□□□□ -0.23
Smim1P0C8K7 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC13.61□□□□□ -0.23
Smim1P0C8K7 Mir3960-201ENSMUST00000198213 73 ntBASIC13.61□□□□□ -0.23
Smim1P0C8K7 BC021767-201ENSMUST00000126387 1716 ntBASIC13.61□□□□□ -0.23
Smim1P0C8K7 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Smim1P0C8K7 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Smim1P0C8K7 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Smim1P0C8K7 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Smim1P0C8K7 Gm43548-201ENSMUST00000197139 2353 ntBASIC13.6□□□□□ -0.23
Smim1P0C8K7 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smim1P0C8K7 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smim1P0C8K7 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC13.6□□□□□ -0.23
Smim1P0C8K7 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smim1P0C8K7 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Smim1P0C8K7 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Smim1P0C8K7 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smim1P0C8K7 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Smim1P0C8K7 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smim1P0C8K7 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smim1P0C8K7 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Smim1P0C8K7 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smim1P0C8K7 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Smim1P0C8K7 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smim1P0C8K7 Gm37811-201ENSMUST00000192416 2601 ntBASIC13.6□□□□□ -0.23
Smim1P0C8K7 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Smim1P0C8K7 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smim1P0C8K7 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC13.59□□□□□ -0.23
Smim1P0C8K7 Ddx41-204ENSMUST00000224765 2199 ntBASIC13.59□□□□□ -0.23
Smim1P0C8K7 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smim1P0C8K7 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC13.59□□□□□ -0.23
Smim1P0C8K7 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Smim1P0C8K7 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smim1P0C8K7 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smim1P0C8K7 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smim1P0C8K7 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smim1P0C8K7 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smim1P0C8K7 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smim1P0C8K7 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smim1P0C8K7 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smim1P0C8K7 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Smim1P0C8K7 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
Smim1P0C8K7 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smim1P0C8K7 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smim1P0C8K7 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Smim1P0C8K7 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smim1P0C8K7 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smim1P0C8K7 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smim1P0C8K7 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smim1P0C8K7 Gm42809-201ENSMUST00000198429 1138 ntBASIC13.58□□□□□ -0.24
Smim1P0C8K7 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC13.58□□□□□ -0.24
Smim1P0C8K7 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smim1P0C8K7 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smim1P0C8K7 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smim1P0C8K7 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Smim1P0C8K7 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smim1P0C8K7 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Smim1P0C8K7 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Smim1P0C8K7 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Smim1P0C8K7 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smim1P0C8K7 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smim1P0C8K7 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smim1P0C8K7 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smim1P0C8K7 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smim1P0C8K7 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Smim1P0C8K7 Gm45855-201ENSMUST00000212546 880 ntBASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms