Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
H3f3cP02301 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
H3f3cP02301 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
H3f3cP02301 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
H3f3cP02301 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
H3f3cP02301 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC16.86■□□□□ 0.29
H3f3cP02301 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
H3f3cP02301 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
H3f3cP02301 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC16.86■□□□□ 0.29
H3f3cP02301 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC16.86■□□□□ 0.29
H3f3cP02301 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC16.86■□□□□ 0.29
H3f3cP02301 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC16.86■□□□□ 0.29
H3f3cP02301 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
H3f3cP02301 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
H3f3cP02301 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
H3f3cP02301 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
H3f3cP02301 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.86■□□□□ 0.29
H3f3cP02301 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
H3f3cP02301 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
H3f3cP02301 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
H3f3cP02301 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
H3f3cP02301 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
H3f3cP02301 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
H3f3cP02301 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
H3f3cP02301 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
H3f3cP02301 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
H3f3cP02301 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
H3f3cP02301 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
H3f3cP02301 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
H3f3cP02301 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC16.85■□□□□ 0.29
H3f3cP02301 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
H3f3cP02301 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
H3f3cP02301 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
H3f3cP02301 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
H3f3cP02301 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
H3f3cP02301 Appbp2os-202ENSMUST00000206972 447 ntBASIC16.84■□□□□ 0.29
H3f3cP02301 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
H3f3cP02301 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC16.84■□□□□ 0.29
H3f3cP02301 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
H3f3cP02301 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
H3f3cP02301 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
H3f3cP02301 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
H3f3cP02301 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
H3f3cP02301 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
H3f3cP02301 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
H3f3cP02301 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
H3f3cP02301 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
H3f3cP02301 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
H3f3cP02301 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
H3f3cP02301 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
H3f3cP02301 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
H3f3cP02301 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
H3f3cP02301 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
H3f3cP02301 Gm5576-201ENSMUST00000075809 1236 ntBASIC16.83■□□□□ 0.28
H3f3cP02301 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
H3f3cP02301 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
H3f3cP02301 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
H3f3cP02301 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
H3f3cP02301 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
H3f3cP02301 Gm6085-201ENSMUST00000182774 1470 ntBASIC16.82■□□□□ 0.28
H3f3cP02301 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
H3f3cP02301 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
H3f3cP02301 Gm43137-201ENSMUST00000198052 594 ntBASIC16.82■□□□□ 0.28
H3f3cP02301 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
H3f3cP02301 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
H3f3cP02301 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
H3f3cP02301 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
H3f3cP02301 Gm37035-201ENSMUST00000194809 2148 ntBASIC16.82■□□□□ 0.28
H3f3cP02301 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
H3f3cP02301 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
H3f3cP02301 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
H3f3cP02301 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
H3f3cP02301 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC16.81■□□□□ 0.28
H3f3cP02301 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
H3f3cP02301 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
H3f3cP02301 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC16.81■□□□□ 0.28
H3f3cP02301 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC16.81■□□□□ 0.28
H3f3cP02301 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
H3f3cP02301 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
H3f3cP02301 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
H3f3cP02301 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
H3f3cP02301 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
H3f3cP02301 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
H3f3cP02301 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
H3f3cP02301 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
H3f3cP02301 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
H3f3cP02301 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
H3f3cP02301 Gm27454-201ENSMUST00000185090 204 ntBASIC16.8■□□□□ 0.28
H3f3cP02301 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
H3f3cP02301 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
H3f3cP02301 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC16.8■□□□□ 0.28
H3f3cP02301 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
H3f3cP02301 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
H3f3cP02301 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
H3f3cP02301 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
H3f3cP02301 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
H3f3cP02301 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
H3f3cP02301 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
H3f3cP02301 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
H3f3cP02301 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms