Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hbb-b1P02088 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Hbb-b1P02088 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Hbb-b1P02088 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.18
Hbb-b1P02088 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Hbb-b1P02088 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Hbb-b1P02088 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Hbb-b1P02088 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Hbb-b1P02088 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC13.95□□□□□ -0.18
Hbb-b1P02088 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Hbb-b1P02088 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Hbb-b1P02088 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hbb-b1P02088 Gm43909-201ENSMUST00000203443 1876 ntBASIC13.95□□□□□ -0.18
Hbb-b1P02088 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hbb-b1P02088 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hbb-b1P02088 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hbb-b1P02088 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hbb-b1P02088 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Hbb-b1P02088 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hbb-b1P02088 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Hbb-b1P02088 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Hbb-b1P02088 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hbb-b1P02088 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hbb-b1P02088 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hbb-b1P02088 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Hbb-b1P02088 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC13.95□□□□□ -0.18
Hbb-b1P02088 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Hbb-b1P02088 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Hbb-b1P02088 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hbb-b1P02088 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Hbb-b1P02088 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hbb-b1P02088 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hbb-b1P02088 Gm45606-201ENSMUST00000209836 2795 ntBASIC13.94□□□□□ -0.18
Hbb-b1P02088 Gm4799-201ENSMUST00000095396 657 ntBASIC13.94□□□□□ -0.18
Hbb-b1P02088 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Hbb-b1P02088 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC13.94□□□□□ -0.18
Hbb-b1P02088 Grk6-206ENSMUST00000224995 2971 ntBASIC13.94□□□□□ -0.18
Hbb-b1P02088 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hbb-b1P02088 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hbb-b1P02088 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Hbb-b1P02088 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hbb-b1P02088 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hbb-b1P02088 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hbb-b1P02088 Gm19439-201ENSMUST00000198195 2273 ntBASIC13.93□□□□□ -0.18
Hbb-b1P02088 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Hbb-b1P02088 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Hbb-b1P02088 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Hbb-b1P02088 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hbb-b1P02088 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC13.93□□□□□ -0.18
Hbb-b1P02088 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Hbb-b1P02088 Gm45141-201ENSMUST00000206502 1888 ntBASIC13.93□□□□□ -0.18
Hbb-b1P02088 Gm6627-201ENSMUST00000218299 2386 ntBASIC13.93□□□□□ -0.18
Hbb-b1P02088 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hbb-b1P02088 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hbb-b1P02088 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Hbb-b1P02088 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hbb-b1P02088 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Hbb-b1P02088 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hbb-b1P02088 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
Hbb-b1P02088 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hbb-b1P02088 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC13.92□□□□□ -0.18
Hbb-b1P02088 Nkain2-201ENSMUST00000092602 558 ntBASIC13.92□□□□□ -0.18
Hbb-b1P02088 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hbb-b1P02088 Gm10461-201ENSMUST00000202073 4786 ntBASIC13.92□□□□□ -0.18
Hbb-b1P02088 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Hbb-b1P02088 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hbb-b1P02088 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hbb-b1P02088 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hbb-b1P02088 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hbb-b1P02088 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hbb-b1P02088 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hbb-b1P02088 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hbb-b1P02088 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hbb-b1P02088 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hbb-b1P02088 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Hbb-b1P02088 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hbb-b1P02088 AC116713.1-201ENSMUST00000215074 430 ntBASIC13.91□□□□□ -0.18
Hbb-b1P02088 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC13.91□□□□□ -0.18
Hbb-b1P02088 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Hbb-b1P02088 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Hbb-b1P02088 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC13.91□□□□□ -0.18
Hbb-b1P02088 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hbb-b1P02088 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC13.91□□□□□ -0.18
Hbb-b1P02088 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hbb-b1P02088 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hbb-b1P02088 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Hbb-b1P02088 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Hbb-b1P02088 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC13.91□□□□□ -0.18
Hbb-b1P02088 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hbb-b1P02088 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hbb-b1P02088 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Hbb-b1P02088 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC13.9□□□□□ -0.18
Hbb-b1P02088 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hbb-b1P02088 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hbb-b1P02088 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hbb-b1P02088 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hbb-b1P02088 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC13.9□□□□□ -0.18
Hbb-b1P02088 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Hbb-b1P02088 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hbb-b1P02088 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms