Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
Syn1O88935 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Syn1O88935 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Syn1O88935 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.42■□□□□ 0.86
Syn1O88935 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.42■□□□□ 0.86
Syn1O88935 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC20.42■□□□□ 0.86
Syn1O88935 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Syn1O88935 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Syn1O88935 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.41■□□□□ 0.86
Syn1O88935 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Syn1O88935 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Syn1O88935 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.41■□□□□ 0.86
Syn1O88935 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Syn1O88935 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Syn1O88935 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Syn1O88935 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Syn1O88935 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Syn1O88935 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Syn1O88935 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.4■□□□□ 0.86
Syn1O88935 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Syn1O88935 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Syn1O88935 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Syn1O88935 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Syn1O88935 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Syn1O88935 Trmt13-210ENSMUST00000198454 880 ntBASIC20.39■□□□□ 0.85
Syn1O88935 Gm44878-201ENSMUST00000205812 1295 ntBASIC20.39■□□□□ 0.85
Syn1O88935 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Syn1O88935 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Syn1O88935 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Syn1O88935 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Syn1O88935 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Syn1O88935 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Syn1O88935 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Syn1O88935 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Syn1O88935 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Syn1O88935 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Syn1O88935 Gm7290-201ENSMUST00000104990 617 ntBASIC20.38■□□□□ 0.85
Syn1O88935 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Syn1O88935 Gm12918-201ENSMUST00000120234 636 ntBASIC20.38■□□□□ 0.85
Syn1O88935 Gm15710-201ENSMUST00000121821 636 ntBASIC20.38■□□□□ 0.85
Syn1O88935 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Syn1O88935 Gm5075-201ENSMUST00000196916 622 ntBASIC20.38■□□□□ 0.85
Syn1O88935 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Syn1O88935 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC20.38■□□□□ 0.85
Syn1O88935 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.38■□□□□ 0.85
Syn1O88935 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.38■□□□□ 0.85
Syn1O88935 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Syn1O88935 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Syn1O88935 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.37■□□□□ 0.85
Syn1O88935 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.37■□□□□ 0.85
Syn1O88935 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC20.37■□□□□ 0.85
Syn1O88935 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.37■□□□□ 0.85
Syn1O88935 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Syn1O88935 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Syn1O88935 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Syn1O88935 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Syn1O88935 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
Syn1O88935 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Syn1O88935 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Syn1O88935 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Syn1O88935 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.36■□□□□ 0.85
Syn1O88935 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Syn1O88935 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Syn1O88935 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Syn1O88935 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Syn1O88935 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.36■□□□□ 0.85
Syn1O88935 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Syn1O88935 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Syn1O88935 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Syn1O88935 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Syn1O88935 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Syn1O88935 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Syn1O88935 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Syn1O88935 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Syn1O88935 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Syn1O88935 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.35■□□□□ 0.85
Syn1O88935 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Syn1O88935 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Syn1O88935 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Syn1O88935 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
Syn1O88935 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC20.34■□□□□ 0.85
Syn1O88935 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Syn1O88935 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Syn1O88935 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Syn1O88935 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Syn1O88935 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Syn1O88935 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Syn1O88935 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Syn1O88935 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Syn1O88935 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Syn1O88935 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Syn1O88935 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC20.33■□□□□ 0.85
Syn1O88935 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.33■□□□□ 0.85
Syn1O88935 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC20.33■□□□□ 0.85
Syn1O88935 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Syn1O88935 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Syn1O88935 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.84
Syn1O88935 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Syn1O88935 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Syn1O88935 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC20.32■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms