Protein–RNA interactions for Protein: O88456

Capns1, Calpain small subunit 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capns1O88456 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Capns1O88456 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Capns1O88456 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Capns1O88456 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.13■□□□□ 0.49
Capns1O88456 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Capns1O88456 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Capns1O88456 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Capns1O88456 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Capns1O88456 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Capns1O88456 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Capns1O88456 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Capns1O88456 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Capns1O88456 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Capns1O88456 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Capns1O88456 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Capns1O88456 Gm21956-201ENSMUST00000179946 522 ntBASIC18.12■□□□□ 0.49
Capns1O88456 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Capns1O88456 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.12■□□□□ 0.49
Capns1O88456 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.12■□□□□ 0.49
Capns1O88456 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Capns1O88456 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.12■□□□□ 0.49
Capns1O88456 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Capns1O88456 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Capns1O88456 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Capns1O88456 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Capns1O88456 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Capns1O88456 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Capns1O88456 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Capns1O88456 Gm9847-201ENSMUST00000052528 599 ntBASIC18.11■□□□□ 0.49
Capns1O88456 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Capns1O88456 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Capns1O88456 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Capns1O88456 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Capns1O88456 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Capns1O88456 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Capns1O88456 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Capns1O88456 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Capns1O88456 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Capns1O88456 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Capns1O88456 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.1■□□□□ 0.49
Capns1O88456 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Capns1O88456 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Capns1O88456 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Capns1O88456 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Capns1O88456 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Capns1O88456 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Capns1O88456 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Capns1O88456 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Capns1O88456 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Capns1O88456 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.09■□□□□ 0.49
Capns1O88456 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.09■□□□□ 0.49
Capns1O88456 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Capns1O88456 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.09■□□□□ 0.49
Capns1O88456 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Capns1O88456 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Capns1O88456 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Capns1O88456 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Capns1O88456 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Capns1O88456 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.08■□□□□ 0.49
Capns1O88456 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Capns1O88456 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Capns1O88456 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Capns1O88456 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.08■□□□□ 0.48
Capns1O88456 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.08■□□□□ 0.48
Capns1O88456 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.08■□□□□ 0.48
Capns1O88456 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Capns1O88456 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Capns1O88456 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Capns1O88456 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Capns1O88456 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Capns1O88456 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Capns1O88456 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Capns1O88456 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Capns1O88456 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Capns1O88456 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.07■□□□□ 0.48
Capns1O88456 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Capns1O88456 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Capns1O88456 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Capns1O88456 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.07■□□□□ 0.48
Capns1O88456 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Capns1O88456 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.06■□□□□ 0.48
Capns1O88456 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Capns1O88456 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.06■□□□□ 0.48
Capns1O88456 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Capns1O88456 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Capns1O88456 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Capns1O88456 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Capns1O88456 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Capns1O88456 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Capns1O88456 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Capns1O88456 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Capns1O88456 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Capns1O88456 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.05■□□□□ 0.48
Capns1O88456 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Capns1O88456 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.05■□□□□ 0.48
Capns1O88456 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Capns1O88456 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.05■□□□□ 0.48
Capns1O88456 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Capns1O88456 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Capns1O88456 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms