Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pde6dO55057 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pde6dO55057 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pde6dO55057 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pde6dO55057 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pde6dO55057 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pde6dO55057 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pde6dO55057 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pde6dO55057 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
Pde6dO55057 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pde6dO55057 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pde6dO55057 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC15.54■□□□□ 0.08
Pde6dO55057 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pde6dO55057 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pde6dO55057 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pde6dO55057 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pde6dO55057 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pde6dO55057 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pde6dO55057 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Pde6dO55057 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pde6dO55057 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pde6dO55057 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pde6dO55057 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pde6dO55057 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pde6dO55057 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pde6dO55057 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Pde6dO55057 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pde6dO55057 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pde6dO55057 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pde6dO55057 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pde6dO55057 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Pde6dO55057 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pde6dO55057 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pde6dO55057 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pde6dO55057 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pde6dO55057 Gm43231-201ENSMUST00000202960 2258 ntBASIC15.52■□□□□ 0.08
Pde6dO55057 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC15.52■□□□□ 0.08
Pde6dO55057 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pde6dO55057 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pde6dO55057 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pde6dO55057 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC15.52■□□□□ 0.08
Pde6dO55057 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Pde6dO55057 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC15.52■□□□□ 0.08
Pde6dO55057 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pde6dO55057 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pde6dO55057 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Pde6dO55057 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Pde6dO55057 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Pde6dO55057 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pde6dO55057 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pde6dO55057 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pde6dO55057 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pde6dO55057 AC166356.1-201ENSMUST00000228236 1426 ntBASIC15.51■□□□□ 0.07
Pde6dO55057 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC15.51■□□□□ 0.07
Pde6dO55057 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Pde6dO55057 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pde6dO55057 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pde6dO55057 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pde6dO55057 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pde6dO55057 AC126028.2-201ENSMUST00000228100 1833 ntBASIC15.51■□□□□ 0.07
Pde6dO55057 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC15.51■□□□□ 0.07
Pde6dO55057 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pde6dO55057 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pde6dO55057 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Pde6dO55057 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pde6dO55057 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pde6dO55057 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Pde6dO55057 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pde6dO55057 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pde6dO55057 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pde6dO55057 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pde6dO55057 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pde6dO55057 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pde6dO55057 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Pde6dO55057 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pde6dO55057 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pde6dO55057 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pde6dO55057 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC15.5■□□□□ 0.07
Pde6dO55057 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC15.5■□□□□ 0.07
Pde6dO55057 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pde6dO55057 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pde6dO55057 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pde6dO55057 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
Pde6dO55057 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pde6dO55057 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pde6dO55057 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC15.49■□□□□ 0.07
Pde6dO55057 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC15.49■□□□□ 0.07
Pde6dO55057 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC15.49■□□□□ 0.07
Pde6dO55057 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC15.49■□□□□ 0.07
Pde6dO55057 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC15.49■□□□□ 0.07
Pde6dO55057 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pde6dO55057 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pde6dO55057 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pde6dO55057 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pde6dO55057 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pde6dO55057 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pde6dO55057 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pde6dO55057 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pde6dO55057 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pde6dO55057 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms