Protein–RNA interactions for Protein: O54962

Banf1, Barrier-to-autointegration factor, mousemouse

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Banf1O54962 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Banf1O54962 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Banf1O54962 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Banf1O54962 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Banf1O54962 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Banf1O54962 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Banf1O54962 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Banf1O54962 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Banf1O54962 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.07■□□□□ 0.8
Banf1O54962 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Banf1O54962 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Banf1O54962 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Banf1O54962 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Banf1O54962 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Banf1O54962 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Banf1O54962 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Banf1O54962 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Banf1O54962 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Banf1O54962 Gm9870-201ENSMUST00000063874 645 ntBASIC20.06■□□□□ 0.8
Banf1O54962 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Banf1O54962 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Banf1O54962 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Banf1O54962 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Banf1O54962 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Banf1O54962 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.05■□□□□ 0.8
Banf1O54962 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Banf1O54962 Gm43530-201ENSMUST00000195920 274 ntBASIC20.05■□□□□ 0.8
Banf1O54962 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Banf1O54962 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Banf1O54962 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Banf1O54962 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Banf1O54962 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.05■□□□□ 0.8
Banf1O54962 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Banf1O54962 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Banf1O54962 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Banf1O54962 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Banf1O54962 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Banf1O54962 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Banf1O54962 Mir6236-201ENSMUST00000184437 123 ntBASIC20.04■□□□□ 0.8
Banf1O54962 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.04■□□□□ 0.8
Banf1O54962 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Banf1O54962 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.04■□□□□ 0.8
Banf1O54962 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Banf1O54962 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Banf1O54962 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Banf1O54962 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.03■□□□□ 0.8
Banf1O54962 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Banf1O54962 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Banf1O54962 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Banf1O54962 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Banf1O54962 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.03■□□□□ 0.8
Banf1O54962 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Banf1O54962 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.03■□□□□ 0.8
Banf1O54962 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Banf1O54962 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Banf1O54962 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Banf1O54962 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Banf1O54962 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Banf1O54962 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Banf1O54962 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Banf1O54962 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Banf1O54962 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Banf1O54962 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.02■□□□□ 0.8
Banf1O54962 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.02■□□□□ 0.8
Banf1O54962 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Banf1O54962 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Banf1O54962 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Banf1O54962 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.02■□□□□ 0.79
Banf1O54962 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.02■□□□□ 0.79
Banf1O54962 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Banf1O54962 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.01■□□□□ 0.79
Banf1O54962 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Banf1O54962 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Banf1O54962 Gm5812-201ENSMUST00000061073 957 ntBASIC20.01■□□□□ 0.79
Banf1O54962 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
Banf1O54962 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Banf1O54962 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Banf1O54962 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Banf1O54962 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Banf1O54962 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Banf1O54962 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20■□□□□ 0.79
Banf1O54962 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20■□□□□ 0.79
Banf1O54962 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Banf1O54962 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Banf1O54962 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Banf1O54962 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Banf1O54962 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Banf1O54962 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Banf1O54962 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Banf1O54962 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Banf1O54962 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Banf1O54962 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Banf1O54962 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Banf1O54962 Gm7417-201ENSMUST00000192950 473 ntBASIC19.98■□□□□ 0.79
Banf1O54962 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.98■□□□□ 0.79
Banf1O54962 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
Banf1O54962 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Banf1O54962 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
Banf1O54962 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Banf1O54962 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms