Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Gm5067-201ENSMUST00000170449 1009 ntBASIC17.87■□□□□ 0.45
Matn3O35701 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Matn3O35701 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC17.87■□□□□ 0.45
Matn3O35701 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Matn3O35701 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Matn3O35701 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Matn3O35701 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.87■□□□□ 0.45
Matn3O35701 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Matn3O35701 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Matn3O35701 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Matn3O35701 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Matn3O35701 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Matn3O35701 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Matn3O35701 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Matn3O35701 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Matn3O35701 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Matn3O35701 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Matn3O35701 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Matn3O35701 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Matn3O35701 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Matn3O35701 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Matn3O35701 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Matn3O35701 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Matn3O35701 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Matn3O35701 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Matn3O35701 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Matn3O35701 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC17.85■□□□□ 0.45
Matn3O35701 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Matn3O35701 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Matn3O35701 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Matn3O35701 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC17.85■□□□□ 0.45
Matn3O35701 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC17.85■□□□□ 0.45
Matn3O35701 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Matn3O35701 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Matn3O35701 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Matn3O35701 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Matn3O35701 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Matn3O35701 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Matn3O35701 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Matn3O35701 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Matn3O35701 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Matn3O35701 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Matn3O35701 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Matn3O35701 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Matn3O35701 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Matn3O35701 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Matn3O35701 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Matn3O35701 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Matn3O35701 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Matn3O35701 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Matn3O35701 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Matn3O35701 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.83■□□□□ 0.45
Matn3O35701 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Matn3O35701 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Matn3O35701 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Matn3O35701 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Matn3O35701 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Matn3O35701 Gm10420-201ENSMUST00000121713 882 ntBASIC17.83■□□□□ 0.44
Matn3O35701 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Matn3O35701 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Matn3O35701 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Matn3O35701 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Matn3O35701 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Matn3O35701 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.82■□□□□ 0.44
Matn3O35701 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Matn3O35701 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Matn3O35701 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Matn3O35701 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Matn3O35701 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Matn3O35701 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Matn3O35701 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Matn3O35701 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Matn3O35701 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Matn3O35701 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
Matn3O35701 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Matn3O35701 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Matn3O35701 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Matn3O35701 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Matn3O35701 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Matn3O35701 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC17.81■□□□□ 0.44
Matn3O35701 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Matn3O35701 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Matn3O35701 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Matn3O35701 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Matn3O35701 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Matn3O35701 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Matn3O35701 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Matn3O35701 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Matn3O35701 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Matn3O35701 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.8■□□□□ 0.44
Matn3O35701 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Matn3O35701 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Matn3O35701 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Matn3O35701 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Matn3O35701 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Matn3O35701 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Matn3O35701 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Matn3O35701 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Matn3O35701 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Matn3O35701 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms