Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.43■□□□□ 0.7
Slc1a6O35544 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slc1a6O35544 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Slc1a6O35544 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slc1a6O35544 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slc1a6O35544 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slc1a6O35544 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slc1a6O35544 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc1a6O35544 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
Slc1a6O35544 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Slc1a6O35544 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.42■□□□□ 0.7
Slc1a6O35544 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.42■□□□□ 0.7
Slc1a6O35544 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc1a6O35544 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc1a6O35544 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc1a6O35544 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Slc1a6O35544 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.41■□□□□ 0.7
Slc1a6O35544 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc1a6O35544 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Slc1a6O35544 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc1a6O35544 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc1a6O35544 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc1a6O35544 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc1a6O35544 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.4■□□□□ 0.7
Slc1a6O35544 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.4■□□□□ 0.7
Slc1a6O35544 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc1a6O35544 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.4■□□□□ 0.7
Slc1a6O35544 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Slc1a6O35544 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Slc1a6O35544 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc1a6O35544 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc1a6O35544 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc1a6O35544 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc1a6O35544 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc1a6O35544 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.4■□□□□ 0.7
Slc1a6O35544 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Slc1a6O35544 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Slc1a6O35544 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc1a6O35544 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.39■□□□□ 0.7
Slc1a6O35544 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc1a6O35544 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
Slc1a6O35544 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc1a6O35544 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc1a6O35544 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc1a6O35544 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.39■□□□□ 0.69
Slc1a6O35544 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc1a6O35544 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc1a6O35544 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Slc1a6O35544 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc1a6O35544 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc1a6O35544 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Slc1a6O35544 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc1a6O35544 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Slc1a6O35544 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc1a6O35544 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc1a6O35544 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Slc1a6O35544 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc1a6O35544 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc1a6O35544 Gm10232-201ENSMUST00000089221 720 ntBASIC19.38■□□□□ 0.69
Slc1a6O35544 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc1a6O35544 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc1a6O35544 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Slc1a6O35544 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc1a6O35544 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Slc1a6O35544 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.37■□□□□ 0.69
Slc1a6O35544 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc1a6O35544 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc1a6O35544 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc1a6O35544 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Slc1a6O35544 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc1a6O35544 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Slc1a6O35544 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc1a6O35544 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Slc1a6O35544 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc1a6O35544 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc1a6O35544 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc1a6O35544 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc1a6O35544 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc1a6O35544 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.36■□□□□ 0.69
Slc1a6O35544 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
Slc1a6O35544 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc1a6O35544 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc1a6O35544 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc1a6O35544 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc1a6O35544 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Slc1a6O35544 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc1a6O35544 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc1a6O35544 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc1a6O35544 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc1a6O35544 Gm5921-201ENSMUST00000075898 882 ntBASIC19.35■□□□□ 0.69
Slc1a6O35544 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Slc1a6O35544 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc1a6O35544 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Slc1a6O35544 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc1a6O35544 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Slc1a6O35544 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc1a6O35544 Golph3-205ENSMUST00000228671 2842 ntBASIC19.34■□□□□ 0.69
Slc1a6O35544 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Slc1a6O35544 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Slc1a6O35544 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms