Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
Col15a1O35206 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Col15a1O35206 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC25.66■■□□□ 1.7
Col15a1O35206 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
Col15a1O35206 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
Col15a1O35206 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Col15a1O35206 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
Col15a1O35206 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Col15a1O35206 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Col15a1O35206 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Col15a1O35206 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Col15a1O35206 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
Col15a1O35206 Gm12527-201ENSMUST00000117967 564 ntBASIC25.63■■□□□ 1.69
Col15a1O35206 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC25.63■■□□□ 1.69
Col15a1O35206 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC25.63■■□□□ 1.69
Col15a1O35206 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Col15a1O35206 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Col15a1O35206 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
Col15a1O35206 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC25.63■■□□□ 1.69
Col15a1O35206 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Col15a1O35206 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Col15a1O35206 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Col15a1O35206 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Col15a1O35206 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Col15a1O35206 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Col15a1O35206 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Col15a1O35206 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Col15a1O35206 Gm38205-201ENSMUST00000192243 258 ntBASIC25.62■■□□□ 1.69
Col15a1O35206 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Col15a1O35206 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC25.61■■□□□ 1.69
Col15a1O35206 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC25.61■■□□□ 1.69
Col15a1O35206 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Col15a1O35206 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
Col15a1O35206 Gm32051-202ENSMUST00000197905 2385 ntBASIC25.61■■□□□ 1.69
Col15a1O35206 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Col15a1O35206 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Col15a1O35206 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Col15a1O35206 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
Col15a1O35206 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
Col15a1O35206 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC25.6■■□□□ 1.69
Col15a1O35206 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Col15a1O35206 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Col15a1O35206 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Col15a1O35206 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Col15a1O35206 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
Col15a1O35206 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Col15a1O35206 Gm42911-201ENSMUST00000199360 1630 ntBASIC25.59■■□□□ 1.69
Col15a1O35206 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Col15a1O35206 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Col15a1O35206 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Col15a1O35206 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Col15a1O35206 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Col15a1O35206 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC25.58■■□□□ 1.69
Col15a1O35206 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Col15a1O35206 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Col15a1O35206 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Col15a1O35206 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Col15a1O35206 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
Col15a1O35206 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
Col15a1O35206 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Col15a1O35206 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
Col15a1O35206 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
Col15a1O35206 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC25.57■■□□□ 1.68
Col15a1O35206 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Col15a1O35206 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC25.57■■□□□ 1.68
Col15a1O35206 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Col15a1O35206 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC25.57■■□□□ 1.68
Col15a1O35206 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC25.57■■□□□ 1.68
Col15a1O35206 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC25.57■■□□□ 1.68
Col15a1O35206 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Col15a1O35206 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
Col15a1O35206 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC25.56■■□□□ 1.68
Col15a1O35206 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
Col15a1O35206 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Col15a1O35206 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Col15a1O35206 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Col15a1O35206 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Col15a1O35206 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Col15a1O35206 Gm43859-201ENSMUST00000200075 1412 ntBASIC25.55■■□□□ 1.68
Col15a1O35206 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Col15a1O35206 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Col15a1O35206 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Col15a1O35206 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
Col15a1O35206 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
Col15a1O35206 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Col15a1O35206 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
Col15a1O35206 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
Col15a1O35206 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Col15a1O35206 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC25.54■■□□□ 1.68
Col15a1O35206 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Col15a1O35206 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Col15a1O35206 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Col15a1O35206 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Col15a1O35206 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC25.54■■□□□ 1.68
Col15a1O35206 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Col15a1O35206 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Col15a1O35206 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Col15a1O35206 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Col15a1O35206 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC25.53■■□□□ 1.68
Col15a1O35206 Gm13534-201ENSMUST00000121169 513 ntBASIC25.53■■□□□ 1.68
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms