Protein–RNA interactions for Protein: O08785

Clock, Circadian locomoter output cycles protein kaput, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClockO08785 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ClockO08785 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC18.67■□□□□ 0.58
ClockO08785 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.67■□□□□ 0.58
ClockO08785 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
ClockO08785 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ClockO08785 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
ClockO08785 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ClockO08785 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ClockO08785 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
ClockO08785 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.66■□□□□ 0.58
ClockO08785 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ClockO08785 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ClockO08785 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ClockO08785 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
ClockO08785 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ClockO08785 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ClockO08785 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ClockO08785 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ClockO08785 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ClockO08785 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ClockO08785 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ClockO08785 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
ClockO08785 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ClockO08785 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
ClockO08785 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ClockO08785 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ClockO08785 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
ClockO08785 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
ClockO08785 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.65■□□□□ 0.58
ClockO08785 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ClockO08785 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ClockO08785 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ClockO08785 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.58
ClockO08785 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ClockO08785 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
ClockO08785 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ClockO08785 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ClockO08785 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ClockO08785 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ClockO08785 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ClockO08785 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ClockO08785 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.64■□□□□ 0.57
ClockO08785 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ClockO08785 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ClockO08785 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ClockO08785 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ClockO08785 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ClockO08785 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ClockO08785 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ClockO08785 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ClockO08785 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ClockO08785 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ClockO08785 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ClockO08785 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ClockO08785 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ClockO08785 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ClockO08785 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.63■□□□□ 0.57
ClockO08785 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ClockO08785 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ClockO08785 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ClockO08785 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ClockO08785 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ClockO08785 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
ClockO08785 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
ClockO08785 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ClockO08785 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.62■□□□□ 0.57
ClockO08785 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
ClockO08785 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ClockO08785 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
ClockO08785 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ClockO08785 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ClockO08785 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ClockO08785 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ClockO08785 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
ClockO08785 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ClockO08785 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ClockO08785 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ClockO08785 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
ClockO08785 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ClockO08785 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
ClockO08785 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.61■□□□□ 0.57
ClockO08785 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.61■□□□□ 0.57
ClockO08785 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ClockO08785 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.61■□□□□ 0.57
ClockO08785 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ClockO08785 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
ClockO08785 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ClockO08785 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ClockO08785 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
ClockO08785 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ClockO08785 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ClockO08785 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
ClockO08785 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ClockO08785 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ClockO08785 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
ClockO08785 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ClockO08785 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
ClockO08785 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.6■□□□□ 0.57
ClockO08785 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ClockO08785 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms