Protein–RNA interactions for Protein: O08759

Ube3a, Ubiquitin-protein ligase E3A, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3aO08759 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Ube3aO08759 Gm7143-201ENSMUST00000222811 859 ntBASIC21.27■■□□□ 1
Ube3aO08759 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Ube3aO08759 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Ube3aO08759 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
Ube3aO08759 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ube3aO08759 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Ube3aO08759 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Ube3aO08759 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ube3aO08759 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ube3aO08759 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ube3aO08759 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ube3aO08759 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ube3aO08759 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
Ube3aO08759 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ube3aO08759 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Ube3aO08759 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ube3aO08759 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ube3aO08759 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Ube3aO08759 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ube3aO08759 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ube3aO08759 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.24■□□□□ 0.99
Ube3aO08759 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.24■□□□□ 0.99
Ube3aO08759 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ube3aO08759 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Ube3aO08759 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ube3aO08759 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC21.23■□□□□ 0.99
Ube3aO08759 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ube3aO08759 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
Ube3aO08759 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ube3aO08759 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Ube3aO08759 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.23■□□□□ 0.99
Ube3aO08759 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC21.23■□□□□ 0.99
Ube3aO08759 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Ube3aO08759 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC21.23■□□□□ 0.99
Ube3aO08759 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ube3aO08759 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ube3aO08759 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ube3aO08759 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Ube3aO08759 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ube3aO08759 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC21.22■□□□□ 0.99
Ube3aO08759 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ube3aO08759 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ube3aO08759 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ube3aO08759 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ube3aO08759 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ube3aO08759 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ube3aO08759 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ube3aO08759 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC21.21■□□□□ 0.99
Ube3aO08759 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ube3aO08759 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ube3aO08759 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ube3aO08759 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ube3aO08759 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ube3aO08759 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ube3aO08759 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC21.2■□□□□ 0.98
Ube3aO08759 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Ube3aO08759 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.2■□□□□ 0.98
Ube3aO08759 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.2■□□□□ 0.98
Ube3aO08759 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Ube3aO08759 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ube3aO08759 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ube3aO08759 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ube3aO08759 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ube3aO08759 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Ube3aO08759 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ube3aO08759 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ube3aO08759 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ube3aO08759 Cdkn3-203ENSMUST00000227149 1952 ntBASIC21.19■□□□□ 0.98
Ube3aO08759 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ube3aO08759 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Ube3aO08759 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ube3aO08759 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ube3aO08759 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ube3aO08759 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ube3aO08759 Mir6236-201ENSMUST00000184437 123 ntBASIC21.18■□□□□ 0.98
Ube3aO08759 Gm15820-201ENSMUST00000201566 728 ntBASIC21.18■□□□□ 0.98
Ube3aO08759 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ube3aO08759 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ube3aO08759 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ube3aO08759 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ube3aO08759 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Ube3aO08759 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ube3aO08759 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ube3aO08759 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ube3aO08759 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ube3aO08759 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Ube3aO08759 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.17■□□□□ 0.98
Ube3aO08759 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC21.17■□□□□ 0.98
Ube3aO08759 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ube3aO08759 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ube3aO08759 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ube3aO08759 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ube3aO08759 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ube3aO08759 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ube3aO08759 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC21.16■□□□□ 0.98
Ube3aO08759 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ube3aO08759 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ube3aO08759 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.16■□□□□ 0.98
Ube3aO08759 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms