Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh1F7BJK1 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh1F7BJK1 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.74■□□□□ 0.43
Pcdh1F7BJK1 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.74■□□□□ 0.43
Pcdh1F7BJK1 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC17.74■□□□□ 0.43
Pcdh1F7BJK1 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh1F7BJK1 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh1F7BJK1 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh1F7BJK1 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh1F7BJK1 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh1F7BJK1 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.73■□□□□ 0.43
Pcdh1F7BJK1 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdh1F7BJK1 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdh1F7BJK1 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdh1F7BJK1 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdh1F7BJK1 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdh1F7BJK1 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC17.73■□□□□ 0.43
Pcdh1F7BJK1 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Pcdh1F7BJK1 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Pcdh1F7BJK1 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdh1F7BJK1 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh1F7BJK1 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh1F7BJK1 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh1F7BJK1 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh1F7BJK1 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Pcdh1F7BJK1 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC17.72■□□□□ 0.43
Pcdh1F7BJK1 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh1F7BJK1 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh1F7BJK1 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Pcdh1F7BJK1 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh1F7BJK1 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh1F7BJK1 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh1F7BJK1 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdh1F7BJK1 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.71■□□□□ 0.43
Pcdh1F7BJK1 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Pcdh1F7BJK1 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdh1F7BJK1 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Pcdh1F7BJK1 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
Pcdh1F7BJK1 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Pcdh1F7BJK1 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.71■□□□□ 0.43
Pcdh1F7BJK1 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdh1F7BJK1 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Pcdh1F7BJK1 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Pcdh1F7BJK1 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdh1F7BJK1 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdh1F7BJK1 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC17.7■□□□□ 0.42
Pcdh1F7BJK1 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC17.7■□□□□ 0.42
Pcdh1F7BJK1 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdh1F7BJK1 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdh1F7BJK1 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdh1F7BJK1 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
Pcdh1F7BJK1 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdh1F7BJK1 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdh1F7BJK1 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
Pcdh1F7BJK1 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.69■□□□□ 0.42
Pcdh1F7BJK1 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdh1F7BJK1 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdh1F7BJK1 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdh1F7BJK1 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdh1F7BJK1 Mir6236-201ENSMUST00000184437 123 ntBASIC17.69■□□□□ 0.42
Pcdh1F7BJK1 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Pcdh1F7BJK1 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdh1F7BJK1 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdh1F7BJK1 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdh1F7BJK1 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdh1F7BJK1 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdh1F7BJK1 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdh1F7BJK1 Golph3-205ENSMUST00000228671 2842 ntBASIC17.68■□□□□ 0.42
Pcdh1F7BJK1 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh1F7BJK1 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh1F7BJK1 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.68■□□□□ 0.42
Pcdh1F7BJK1 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Pcdh1F7BJK1 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh1F7BJK1 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh1F7BJK1 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Pcdh1F7BJK1 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Pcdh1F7BJK1 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdh1F7BJK1 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Pcdh1F7BJK1 Gm10232-201ENSMUST00000089221 720 ntBASIC17.67■□□□□ 0.42
Pcdh1F7BJK1 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.67■□□□□ 0.42
Pcdh1F7BJK1 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Pcdh1F7BJK1 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdh1F7BJK1 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh1F7BJK1 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Pcdh1F7BJK1 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Pcdh1F7BJK1 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh1F7BJK1 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Pcdh1F7BJK1 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC17.66■□□□□ 0.42
Pcdh1F7BJK1 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh1F7BJK1 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh1F7BJK1 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh1F7BJK1 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh1F7BJK1 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh1F7BJK1 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh1F7BJK1 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh1F7BJK1 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh1F7BJK1 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh1F7BJK1 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh1F7BJK1 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh1F7BJK1 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms