Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
Igkv1-88A0A140T8N1 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Igkv1-88A0A140T8N1 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Igkv1-88A0A140T8N1 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Igkv1-88A0A140T8N1 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Igkv1-88A0A140T8N1 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Igkv1-88A0A140T8N1 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Igkv1-88A0A140T8N1 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Igkv1-88A0A140T8N1 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Igkv1-88A0A140T8N1 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Igkv1-88A0A140T8N1 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Igkv1-88A0A140T8N1 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Igkv1-88A0A140T8N1 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC13.03□□□□□ -0.32
Igkv1-88A0A140T8N1 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC13.03□□□□□ -0.32
Igkv1-88A0A140T8N1 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Igkv1-88A0A140T8N1 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Igkv1-88A0A140T8N1 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Igkv1-88A0A140T8N1 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Igkv1-88A0A140T8N1 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Igkv1-88A0A140T8N1 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Igkv1-88A0A140T8N1 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Igkv1-88A0A140T8N1 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Igkv1-88A0A140T8N1 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Igkv1-88A0A140T8N1 Gm10461-201ENSMUST00000202073 4786 ntBASIC13.03□□□□□ -0.32
Igkv1-88A0A140T8N1 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Igkv1-88A0A140T8N1 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Igkv1-88A0A140T8N1 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Igkv1-88A0A140T8N1 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Igkv1-88A0A140T8N1 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Igkv1-88A0A140T8N1 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC13.02□□□□□ -0.32
Igkv1-88A0A140T8N1 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Igkv1-88A0A140T8N1 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Igkv1-88A0A140T8N1 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Igkv1-88A0A140T8N1 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Igkv1-88A0A140T8N1 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC13.02□□□□□ -0.33
Igkv1-88A0A140T8N1 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC13.02□□□□□ -0.33
Igkv1-88A0A140T8N1 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Igkv1-88A0A140T8N1 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Igkv1-88A0A140T8N1 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Igkv1-88A0A140T8N1 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Igkv1-88A0A140T8N1 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Igkv1-88A0A140T8N1 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Igkv1-88A0A140T8N1 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Igkv1-88A0A140T8N1 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC13.02□□□□□ -0.33
Igkv1-88A0A140T8N1 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Igkv1-88A0A140T8N1 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Igkv1-88A0A140T8N1 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Igkv1-88A0A140T8N1 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC13.01□□□□□ -0.33
Igkv1-88A0A140T8N1 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Igkv1-88A0A140T8N1 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Igkv1-88A0A140T8N1 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Igkv1-88A0A140T8N1 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC13.01□□□□□ -0.33
Igkv1-88A0A140T8N1 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Igkv1-88A0A140T8N1 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC13.01□□□□□ -0.33
Igkv1-88A0A140T8N1 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Igkv1-88A0A140T8N1 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Igkv1-88A0A140T8N1 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Igkv1-88A0A140T8N1 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Igkv1-88A0A140T8N1 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Igkv1-88A0A140T8N1 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Igkv1-88A0A140T8N1 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Igkv1-88A0A140T8N1 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Igkv1-88A0A140T8N1 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Igkv1-88A0A140T8N1 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Igkv1-88A0A140T8N1 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC13□□□□□ -0.33
Igkv1-88A0A140T8N1 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Igkv1-88A0A140T8N1 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Igkv1-88A0A140T8N1 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC13□□□□□ -0.33
Igkv1-88A0A140T8N1 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC13□□□□□ -0.33
Igkv1-88A0A140T8N1 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Igkv1-88A0A140T8N1 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC13□□□□□ -0.33
Igkv1-88A0A140T8N1 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Igkv1-88A0A140T8N1 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Igkv1-88A0A140T8N1 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC13□□□□□ -0.33
Igkv1-88A0A140T8N1 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC13□□□□□ -0.33
Igkv1-88A0A140T8N1 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Igkv1-88A0A140T8N1 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Igkv1-88A0A140T8N1 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC13□□□□□ -0.33
Igkv1-88A0A140T8N1 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Igkv1-88A0A140T8N1 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Igkv1-88A0A140T8N1 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Igkv1-88A0A140T8N1 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Igkv1-88A0A140T8N1 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Igkv1-88A0A140T8N1 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Igkv1-88A0A140T8N1 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Igkv1-88A0A140T8N1 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Igkv1-88A0A140T8N1 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Igkv1-88A0A140T8N1 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Igkv1-88A0A140T8N1 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC12.99□□□□□ -0.33
Igkv1-88A0A140T8N1 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Igkv1-88A0A140T8N1 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Igkv1-88A0A140T8N1 Nsd1-203ENSMUST00000224156 1149 ntBASIC12.99□□□□□ -0.33
Igkv1-88A0A140T8N1 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Igkv1-88A0A140T8N1 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Igkv1-88A0A140T8N1 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
Igkv1-88A0A140T8N1 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Igkv1-88A0A140T8N1 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Igkv1-88A0A140T8N1 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Igkv1-88A0A140T8N1 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Igkv1-88A0A140T8N1 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms