Protein–RNA interactions for Protein: A0A0G2JF93

Trav13n-2, T cell receptor alpha variable 13D-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-2A0A0G2JF93 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13n-2A0A0G2JF93 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13n-2A0A0G2JF93 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13n-2A0A0G2JF93 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13n-2A0A0G2JF93 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13n-2A0A0G2JF93 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13n-2A0A0G2JF93 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC13.05□□□□□ -0.32
Trav13n-2A0A0G2JF93 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13n-2A0A0G2JF93 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13n-2A0A0G2JF93 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13n-2A0A0G2JF93 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Trav13n-2A0A0G2JF93 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13n-2A0A0G2JF93 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13n-2A0A0G2JF93 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13n-2A0A0G2JF93 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13n-2A0A0G2JF93 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13n-2A0A0G2JF93 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13n-2A0A0G2JF93 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13n-2A0A0G2JF93 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13n-2A0A0G2JF93 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13n-2A0A0G2JF93 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13n-2A0A0G2JF93 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13n-2A0A0G2JF93 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13n-2A0A0G2JF93 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13n-2A0A0G2JF93 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13n-2A0A0G2JF93 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trav13n-2A0A0G2JF93 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13n-2A0A0G2JF93 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13n-2A0A0G2JF93 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13n-2A0A0G2JF93 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13n-2A0A0G2JF93 Nsd1-206ENSMUST00000224918 1001 ntBASIC13.03□□□□□ -0.32
Trav13n-2A0A0G2JF93 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav13n-2A0A0G2JF93 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13n-2A0A0G2JF93 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13n-2A0A0G2JF93 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13n-2A0A0G2JF93 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13n-2A0A0G2JF93 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trav13n-2A0A0G2JF93 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trav13n-2A0A0G2JF93 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13n-2A0A0G2JF93 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trav13n-2A0A0G2JF93 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trav13n-2A0A0G2JF93 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC13.02□□□□□ -0.33
Trav13n-2A0A0G2JF93 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Trav13n-2A0A0G2JF93 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13n-2A0A0G2JF93 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13n-2A0A0G2JF93 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13n-2A0A0G2JF93 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13n-2A0A0G2JF93 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13n-2A0A0G2JF93 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC13.02□□□□□ -0.33
Trav13n-2A0A0G2JF93 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13n-2A0A0G2JF93 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13n-2A0A0G2JF93 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13n-2A0A0G2JF93 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13n-2A0A0G2JF93 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13n-2A0A0G2JF93 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13n-2A0A0G2JF93 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13n-2A0A0G2JF93 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13n-2A0A0G2JF93 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav13n-2A0A0G2JF93 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13n-2A0A0G2JF93 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13n-2A0A0G2JF93 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13n-2A0A0G2JF93 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC13.01□□□□□ -0.33
Trav13n-2A0A0G2JF93 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav13n-2A0A0G2JF93 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Trav13n-2A0A0G2JF93 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13n-2A0A0G2JF93 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13n-2A0A0G2JF93 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13n-2A0A0G2JF93 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13n-2A0A0G2JF93 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13n-2A0A0G2JF93 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Trav13n-2A0A0G2JF93 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13n-2A0A0G2JF93 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13n-2A0A0G2JF93 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13n-2A0A0G2JF93 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC13□□□□□ -0.33
Trav13n-2A0A0G2JF93 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC13□□□□□ -0.33
Trav13n-2A0A0G2JF93 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav13n-2A0A0G2JF93 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13n-2A0A0G2JF93 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13n-2A0A0G2JF93 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13n-2A0A0G2JF93 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav13n-2A0A0G2JF93 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC13□□□□□ -0.33
Trav13n-2A0A0G2JF93 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav13n-2A0A0G2JF93 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13n-2A0A0G2JF93 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13n-2A0A0G2JF93 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13n-2A0A0G2JF93 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
Trav13n-2A0A0G2JF93 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13n-2A0A0G2JF93 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
Trav13n-2A0A0G2JF93 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13n-2A0A0G2JF93 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13n-2A0A0G2JF93 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13n-2A0A0G2JF93 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trav13n-2A0A0G2JF93 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13n-2A0A0G2JF93 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13n-2A0A0G2JF93 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trav13n-2A0A0G2JF93 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13n-2A0A0G2JF93 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav13n-2A0A0G2JF93 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13n-2A0A0G2JF93 Gm38342-201ENSMUST00000195710 2980 ntBASIC12.98□□□□□ -0.33
Trav13n-2A0A0G2JF93 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms