Protein–RNA interactions for Protein: A0A0G2JEV5

Trav7-1, T cell receptor alpha variable 7-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-1A0A0G2JEV5 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC15.16■□□□□ 0.02
Trav7-1A0A0G2JEV5 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav7-1A0A0G2JEV5 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Trav7-1A0A0G2JEV5 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav7-1A0A0G2JEV5 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Trav7-1A0A0G2JEV5 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC15.16■□□□□ 0.02
Trav7-1A0A0G2JEV5 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav7-1A0A0G2JEV5 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Trav7-1A0A0G2JEV5 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav7-1A0A0G2JEV5 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav7-1A0A0G2JEV5 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav7-1A0A0G2JEV5 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC15.16■□□□□ 0.02
Trav7-1A0A0G2JEV5 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav7-1A0A0G2JEV5 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Trav7-1A0A0G2JEV5 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav7-1A0A0G2JEV5 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav7-1A0A0G2JEV5 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav7-1A0A0G2JEV5 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav7-1A0A0G2JEV5 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav7-1A0A0G2JEV5 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav7-1A0A0G2JEV5 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC15.15■□□□□ 0.02
Trav7-1A0A0G2JEV5 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav7-1A0A0G2JEV5 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav7-1A0A0G2JEV5 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC15.14■□□□□ 0.01
Trav7-1A0A0G2JEV5 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav7-1A0A0G2JEV5 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav7-1A0A0G2JEV5 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav7-1A0A0G2JEV5 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav7-1A0A0G2JEV5 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav7-1A0A0G2JEV5 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav7-1A0A0G2JEV5 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav7-1A0A0G2JEV5 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav7-1A0A0G2JEV5 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav7-1A0A0G2JEV5 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trav7-1A0A0G2JEV5 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC15.14■□□□□ 0.01
Trav7-1A0A0G2JEV5 Gm40881-201ENSMUST00000223397 166 ntBASIC15.14■□□□□ 0.01
Trav7-1A0A0G2JEV5 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav7-1A0A0G2JEV5 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav7-1A0A0G2JEV5 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav7-1A0A0G2JEV5 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav7-1A0A0G2JEV5 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav7-1A0A0G2JEV5 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trav7-1A0A0G2JEV5 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav7-1A0A0G2JEV5 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav7-1A0A0G2JEV5 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Trav7-1A0A0G2JEV5 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav7-1A0A0G2JEV5 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav7-1A0A0G2JEV5 Cdkn3-203ENSMUST00000227149 1952 ntBASIC15.13■□□□□ 0.01
Trav7-1A0A0G2JEV5 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Trav7-1A0A0G2JEV5 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Trav7-1A0A0G2JEV5 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC15.13■□□□□ 0.01
Trav7-1A0A0G2JEV5 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav7-1A0A0G2JEV5 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav7-1A0A0G2JEV5 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav7-1A0A0G2JEV5 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Trav7-1A0A0G2JEV5 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav7-1A0A0G2JEV5 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav7-1A0A0G2JEV5 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav7-1A0A0G2JEV5 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav7-1A0A0G2JEV5 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav7-1A0A0G2JEV5 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav7-1A0A0G2JEV5 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav7-1A0A0G2JEV5 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav7-1A0A0G2JEV5 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav7-1A0A0G2JEV5 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav7-1A0A0G2JEV5 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav7-1A0A0G2JEV5 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC15.12■□□□□ 0.01
Trav7-1A0A0G2JEV5 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC15.12■□□□□ 0.01
Trav7-1A0A0G2JEV5 Mir6236-201ENSMUST00000184437 123 ntBASIC15.12■□□□□ 0.01
Trav7-1A0A0G2JEV5 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC15.12■□□□□ 0.01
Trav7-1A0A0G2JEV5 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC15.12■□□□□ 0.01
Trav7-1A0A0G2JEV5 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav7-1A0A0G2JEV5 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav7-1A0A0G2JEV5 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav7-1A0A0G2JEV5 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav7-1A0A0G2JEV5 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav7-1A0A0G2JEV5 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav7-1A0A0G2JEV5 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav7-1A0A0G2JEV5 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trav7-1A0A0G2JEV5 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav7-1A0A0G2JEV5 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
Trav7-1A0A0G2JEV5 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav7-1A0A0G2JEV5 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Trav7-1A0A0G2JEV5 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trav7-1A0A0G2JEV5 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
Trav7-1A0A0G2JEV5 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav7-1A0A0G2JEV5 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Trav7-1A0A0G2JEV5 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav7-1A0A0G2JEV5 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav7-1A0A0G2JEV5 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav7-1A0A0G2JEV5 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Trav7-1A0A0G2JEV5 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav7-1A0A0G2JEV5 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav7-1A0A0G2JEV5 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav7-1A0A0G2JEV5 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav7-1A0A0G2JEV5 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav7-1A0A0G2JEV5 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav7-1A0A0G2JEV5 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC15.1■□□□□ 0.01
Trav7-1A0A0G2JEV5 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Trav7-1A0A0G2JEV5 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 263.7 ms