Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav19A0A0B4J1K4 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav19A0A0B4J1K4 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC14.74□□□□□ -0.05
Trav19A0A0B4J1K4 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav19A0A0B4J1K4 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav19A0A0B4J1K4 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Trav19A0A0B4J1K4 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC14.74□□□□□ -0.05
Trav19A0A0B4J1K4 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav19A0A0B4J1K4 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav19A0A0B4J1K4 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Trav19A0A0B4J1K4 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC14.74□□□□□ -0.05
Trav19A0A0B4J1K4 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Trav19A0A0B4J1K4 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav19A0A0B4J1K4 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav19A0A0B4J1K4 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav19A0A0B4J1K4 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav19A0A0B4J1K4 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
Trav19A0A0B4J1K4 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav19A0A0B4J1K4 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav19A0A0B4J1K4 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav19A0A0B4J1K4 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav19A0A0B4J1K4 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC14.73□□□□□ -0.05
Trav19A0A0B4J1K4 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC14.73□□□□□ -0.05
Trav19A0A0B4J1K4 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav19A0A0B4J1K4 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav19A0A0B4J1K4 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav19A0A0B4J1K4 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav19A0A0B4J1K4 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav19A0A0B4J1K4 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav19A0A0B4J1K4 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav19A0A0B4J1K4 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav19A0A0B4J1K4 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Trav19A0A0B4J1K4 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav19A0A0B4J1K4 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav19A0A0B4J1K4 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav19A0A0B4J1K4 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav19A0A0B4J1K4 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC14.72□□□□□ -0.05
Trav19A0A0B4J1K4 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Trav19A0A0B4J1K4 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC14.72□□□□□ -0.05
Trav19A0A0B4J1K4 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav19A0A0B4J1K4 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC14.72□□□□□ -0.05
Trav19A0A0B4J1K4 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav19A0A0B4J1K4 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav19A0A0B4J1K4 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav19A0A0B4J1K4 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav19A0A0B4J1K4 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav19A0A0B4J1K4 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav19A0A0B4J1K4 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav19A0A0B4J1K4 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav19A0A0B4J1K4 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav19A0A0B4J1K4 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav19A0A0B4J1K4 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav19A0A0B4J1K4 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav19A0A0B4J1K4 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Trav19A0A0B4J1K4 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC14.71□□□□□ -0.05
Trav19A0A0B4J1K4 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Trav19A0A0B4J1K4 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav19A0A0B4J1K4 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav19A0A0B4J1K4 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav19A0A0B4J1K4 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Trav19A0A0B4J1K4 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav19A0A0B4J1K4 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav19A0A0B4J1K4 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav19A0A0B4J1K4 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
Trav19A0A0B4J1K4 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav19A0A0B4J1K4 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Trav19A0A0B4J1K4 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav19A0A0B4J1K4 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav19A0A0B4J1K4 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav19A0A0B4J1K4 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Trav19A0A0B4J1K4 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Trav19A0A0B4J1K4 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav19A0A0B4J1K4 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav19A0A0B4J1K4 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav19A0A0B4J1K4 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav19A0A0B4J1K4 Gm6802-201ENSMUST00000167843 1983 ntBASIC14.69□□□□□ -0.06
Trav19A0A0B4J1K4 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav19A0A0B4J1K4 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav19A0A0B4J1K4 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav19A0A0B4J1K4 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC14.69□□□□□ -0.06
Trav19A0A0B4J1K4 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav19A0A0B4J1K4 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav19A0A0B4J1K4 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav19A0A0B4J1K4 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav19A0A0B4J1K4 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav19A0A0B4J1K4 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Trav19A0A0B4J1K4 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav19A0A0B4J1K4 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Trav19A0A0B4J1K4 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav19A0A0B4J1K4 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav19A0A0B4J1K4 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav19A0A0B4J1K4 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav19A0A0B4J1K4 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC14.68□□□□□ -0.06
Trav19A0A0B4J1K4 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC14.68□□□□□ -0.06
Trav19A0A0B4J1K4 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC14.68□□□□□ -0.06
Trav19A0A0B4J1K4 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav19A0A0B4J1K4 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav19A0A0B4J1K4 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav19A0A0B4J1K4 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC14.68□□□□□ -0.06
Trav19A0A0B4J1K4 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms