Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv13-3A0A0B4J1H2 AC151971.4-201ENSMUST00000214717 704 ntBASIC15.37■□□□□ 0.05
Trbv13-3A0A0B4J1H2 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv13-3A0A0B4J1H2 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv13-3A0A0B4J1H2 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv13-3A0A0B4J1H2 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv13-3A0A0B4J1H2 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv13-3A0A0B4J1H2 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv13-3A0A0B4J1H2 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv13-3A0A0B4J1H2 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv13-3A0A0B4J1H2 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Trbv13-3A0A0B4J1H2 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv13-3A0A0B4J1H2 Gm11847-201ENSMUST00000125165 1119 ntBASIC15.36■□□□□ 0.05
Trbv13-3A0A0B4J1H2 Gm16437-201ENSMUST00000025669 507 ntBASIC15.36■□□□□ 0.05
Trbv13-3A0A0B4J1H2 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv13-3A0A0B4J1H2 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
Trbv13-3A0A0B4J1H2 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv13-3A0A0B4J1H2 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv13-3A0A0B4J1H2 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv13-3A0A0B4J1H2 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv13-3A0A0B4J1H2 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv13-3A0A0B4J1H2 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv13-3A0A0B4J1H2 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv13-3A0A0B4J1H2 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv13-3A0A0B4J1H2 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv13-3A0A0B4J1H2 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv13-3A0A0B4J1H2 Scarna2-201ENSMUST00000157560 414 ntBASIC15.35■□□□□ 0.05
Trbv13-3A0A0B4J1H2 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC15.35■□□□□ 0.05
Trbv13-3A0A0B4J1H2 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv13-3A0A0B4J1H2 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv13-3A0A0B4J1H2 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv13-3A0A0B4J1H2 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Trbv13-3A0A0B4J1H2 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv13-3A0A0B4J1H2 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Trbv13-3A0A0B4J1H2 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv13-3A0A0B4J1H2 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv13-3A0A0B4J1H2 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv13-3A0A0B4J1H2 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv13-3A0A0B4J1H2 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv13-3A0A0B4J1H2 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv13-3A0A0B4J1H2 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trbv13-3A0A0B4J1H2 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv13-3A0A0B4J1H2 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv13-3A0A0B4J1H2 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Trbv13-3A0A0B4J1H2 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv13-3A0A0B4J1H2 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv13-3A0A0B4J1H2 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv13-3A0A0B4J1H2 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trbv13-3A0A0B4J1H2 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Trbv13-3A0A0B4J1H2 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC15.33■□□□□ 0.05
Trbv13-3A0A0B4J1H2 Gm45141-201ENSMUST00000206502 1888 ntBASIC15.33■□□□□ 0.05
Trbv13-3A0A0B4J1H2 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trbv13-3A0A0B4J1H2 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trbv13-3A0A0B4J1H2 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trbv13-3A0A0B4J1H2 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Gm44832-201ENSMUST00000208849 2303 ntBASIC15.33■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC15.32■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Gm9806-201ENSMUST00000051080 552 ntBASIC15.32■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv13-3A0A0B4J1H2 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC15.32■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC15.31■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms