Protein–RNA interactions for Protein: A0A0B4J1G8

Trbv2, T cell receptor beta, variable 2 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv2A0A0B4J1G8 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Trbv2A0A0B4J1G8 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trbv2A0A0B4J1G8 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trbv2A0A0B4J1G8 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trbv2A0A0B4J1G8 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trbv2A0A0B4J1G8 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trbv2A0A0B4J1G8 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trbv2A0A0B4J1G8 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trbv2A0A0B4J1G8 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Trbv2A0A0B4J1G8 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trbv2A0A0B4J1G8 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trbv2A0A0B4J1G8 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trbv2A0A0B4J1G8 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.52■□□□□ 0.4
Trbv2A0A0B4J1G8 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trbv2A0A0B4J1G8 Gm13238-201ENSMUST00000117655 780 ntBASIC17.52■□□□□ 0.4
Trbv2A0A0B4J1G8 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trbv2A0A0B4J1G8 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trbv2A0A0B4J1G8 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trbv2A0A0B4J1G8 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trbv2A0A0B4J1G8 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trbv2A0A0B4J1G8 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Trbv2A0A0B4J1G8 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trbv2A0A0B4J1G8 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trbv2A0A0B4J1G8 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trbv2A0A0B4J1G8 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC17.51■□□□□ 0.39
Trbv2A0A0B4J1G8 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC17.51■□□□□ 0.39
Trbv2A0A0B4J1G8 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trbv2A0A0B4J1G8 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.51■□□□□ 0.39
Trbv2A0A0B4J1G8 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Trbv2A0A0B4J1G8 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trbv2A0A0B4J1G8 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trbv2A0A0B4J1G8 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trbv2A0A0B4J1G8 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trbv2A0A0B4J1G8 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trbv2A0A0B4J1G8 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Trbv2A0A0B4J1G8 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC17.5■□□□□ 0.39
Trbv2A0A0B4J1G8 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trbv2A0A0B4J1G8 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trbv2A0A0B4J1G8 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trbv2A0A0B4J1G8 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Trbv2A0A0B4J1G8 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trbv2A0A0B4J1G8 Golph3-205ENSMUST00000228671 2842 ntBASIC17.49■□□□□ 0.39
Trbv2A0A0B4J1G8 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trbv2A0A0B4J1G8 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trbv2A0A0B4J1G8 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trbv2A0A0B4J1G8 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Trbv2A0A0B4J1G8 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trbv2A0A0B4J1G8 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC17.49■□□□□ 0.39
Trbv2A0A0B4J1G8 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trbv2A0A0B4J1G8 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trbv2A0A0B4J1G8 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trbv2A0A0B4J1G8 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trbv2A0A0B4J1G8 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trbv2A0A0B4J1G8 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.48■□□□□ 0.39
Trbv2A0A0B4J1G8 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trbv2A0A0B4J1G8 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trbv2A0A0B4J1G8 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Trbv2A0A0B4J1G8 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trbv2A0A0B4J1G8 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trbv2A0A0B4J1G8 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Trbv2A0A0B4J1G8 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Trbv2A0A0B4J1G8 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Trbv2A0A0B4J1G8 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trbv2A0A0B4J1G8 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trbv2A0A0B4J1G8 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trbv2A0A0B4J1G8 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trbv2A0A0B4J1G8 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trbv2A0A0B4J1G8 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trbv2A0A0B4J1G8 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trbv2A0A0B4J1G8 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Trbv2A0A0B4J1G8 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trbv2A0A0B4J1G8 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC17.47■□□□□ 0.39
Trbv2A0A0B4J1G8 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trbv2A0A0B4J1G8 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Trbv2A0A0B4J1G8 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trbv2A0A0B4J1G8 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Trbv2A0A0B4J1G8 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Trbv2A0A0B4J1G8 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trbv2A0A0B4J1G8 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trbv2A0A0B4J1G8 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC17.46■□□□□ 0.39
Trbv2A0A0B4J1G8 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
Trbv2A0A0B4J1G8 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trbv2A0A0B4J1G8 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trbv2A0A0B4J1G8 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trbv2A0A0B4J1G8 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.46■□□□□ 0.39
Trbv2A0A0B4J1G8 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Trbv2A0A0B4J1G8 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trbv2A0A0B4J1G8 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trbv2A0A0B4J1G8 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.45■□□□□ 0.38
Trbv2A0A0B4J1G8 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trbv2A0A0B4J1G8 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Trbv2A0A0B4J1G8 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC17.45■□□□□ 0.38
Trbv2A0A0B4J1G8 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.45■□□□□ 0.38
Trbv2A0A0B4J1G8 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trbv2A0A0B4J1G8 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
Trbv2A0A0B4J1G8 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trbv2A0A0B4J1G8 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trbv2A0A0B4J1G8 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trbv2A0A0B4J1G8 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trbv2A0A0B4J1G8 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 10.4 ms