Protein–RNA interactions for Protein: A0A0A6YY38

Ighv1-42, Immunoglobulin heavy variable V1-42 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-42A0A0A6YY38 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ighv1-42A0A0A6YY38 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ighv1-42A0A0A6YY38 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ighv1-42A0A0A6YY38 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ighv1-42A0A0A6YY38 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ighv1-42A0A0A6YY38 Gm37179-201ENSMUST00000194862 823 ntBASIC18.31■□□□□ 0.52
Ighv1-42A0A0A6YY38 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ighv1-42A0A0A6YY38 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.31■□□□□ 0.52
Ighv1-42A0A0A6YY38 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Ighv1-42A0A0A6YY38 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ighv1-42A0A0A6YY38 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ighv1-42A0A0A6YY38 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Ighv1-42A0A0A6YY38 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ighv1-42A0A0A6YY38 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ighv1-42A0A0A6YY38 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ighv1-42A0A0A6YY38 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ighv1-42A0A0A6YY38 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.3■□□□□ 0.52
Ighv1-42A0A0A6YY38 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ighv1-42A0A0A6YY38 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ighv1-42A0A0A6YY38 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ighv1-42A0A0A6YY38 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ighv1-42A0A0A6YY38 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ighv1-42A0A0A6YY38 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ighv1-42A0A0A6YY38 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ighv1-42A0A0A6YY38 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Ighv1-42A0A0A6YY38 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ighv1-42A0A0A6YY38 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ighv1-42A0A0A6YY38 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ighv1-42A0A0A6YY38 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ighv1-42A0A0A6YY38 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ighv1-42A0A0A6YY38 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.29■□□□□ 0.52
Ighv1-42A0A0A6YY38 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
Ighv1-42A0A0A6YY38 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.29■□□□□ 0.52
Ighv1-42A0A0A6YY38 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ighv1-42A0A0A6YY38 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ighv1-42A0A0A6YY38 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ighv1-42A0A0A6YY38 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ighv1-42A0A0A6YY38 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ighv1-42A0A0A6YY38 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ighv1-42A0A0A6YY38 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ighv1-42A0A0A6YY38 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Ighv1-42A0A0A6YY38 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ighv1-42A0A0A6YY38 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ighv1-42A0A0A6YY38 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ighv1-42A0A0A6YY38 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ighv1-42A0A0A6YY38 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ighv1-42A0A0A6YY38 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ighv1-42A0A0A6YY38 Gm13234-201ENSMUST00000120010 747 ntBASIC18.28■□□□□ 0.52
Ighv1-42A0A0A6YY38 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ighv1-42A0A0A6YY38 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ighv1-42A0A0A6YY38 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.28■□□□□ 0.52
Ighv1-42A0A0A6YY38 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.28■□□□□ 0.52
Ighv1-42A0A0A6YY38 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ighv1-42A0A0A6YY38 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Ighv1-42A0A0A6YY38 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ighv1-42A0A0A6YY38 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ighv1-42A0A0A6YY38 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ighv1-42A0A0A6YY38 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ighv1-42A0A0A6YY38 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ighv1-42A0A0A6YY38 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ighv1-42A0A0A6YY38 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ighv1-42A0A0A6YY38 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Ighv1-42A0A0A6YY38 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.27■□□□□ 0.52
Ighv1-42A0A0A6YY38 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.27■□□□□ 0.52
Ighv1-42A0A0A6YY38 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ighv1-42A0A0A6YY38 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ighv1-42A0A0A6YY38 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ighv1-42A0A0A6YY38 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.51
Ighv1-42A0A0A6YY38 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ighv1-42A0A0A6YY38 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
Ighv1-42A0A0A6YY38 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ighv1-42A0A0A6YY38 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.26■□□□□ 0.51
Ighv1-42A0A0A6YY38 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Ighv1-42A0A0A6YY38 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ighv1-42A0A0A6YY38 Reep4-203ENSMUST00000226563 1444 ntBASIC18.25■□□□□ 0.51
Ighv1-42A0A0A6YY38 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ighv1-42A0A0A6YY38 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Ighv1-42A0A0A6YY38 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Ighv1-42A0A0A6YY38 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.25■□□□□ 0.51
Ighv1-42A0A0A6YY38 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ighv1-42A0A0A6YY38 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ighv1-42A0A0A6YY38 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ighv1-42A0A0A6YY38 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Ighv1-42A0A0A6YY38 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ighv1-42A0A0A6YY38 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ighv1-42A0A0A6YY38 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Ighv1-42A0A0A6YY38 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ighv1-42A0A0A6YY38 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
Ighv1-42A0A0A6YY38 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ighv1-42A0A0A6YY38 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
Ighv1-42A0A0A6YY38 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ighv1-42A0A0A6YY38 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ighv1-42A0A0A6YY38 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Ighv1-42A0A0A6YY38 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.24■□□□□ 0.51
Ighv1-42A0A0A6YY38 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ighv1-42A0A0A6YY38 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.24■□□□□ 0.51
Ighv1-42A0A0A6YY38 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ighv1-42A0A0A6YY38 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ighv1-42A0A0A6YY38 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ighv1-42A0A0A6YY38 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms