Protein–RNA interactions for Protein: A0A087WQQ0

Gm28557, Predicted gene 28557, mousemouse

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28557A0A087WQQ0 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Gm28557A0A087WQQ0 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm28557A0A087WQQ0 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Gm28557A0A087WQQ0 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm28557A0A087WQQ0 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Gm28557A0A087WQQ0 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Gm28557A0A087WQQ0 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Gm28557A0A087WQQ0 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC17.73■□□□□ 0.43
Gm28557A0A087WQQ0 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gm28557A0A087WQQ0 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Gm28557A0A087WQQ0 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gm28557A0A087WQQ0 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gm28557A0A087WQQ0 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.73■□□□□ 0.43
Gm28557A0A087WQQ0 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Gm28557A0A087WQQ0 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gm28557A0A087WQQ0 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gm28557A0A087WQQ0 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm28557A0A087WQQ0 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm28557A0A087WQQ0 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.72■□□□□ 0.43
Gm28557A0A087WQQ0 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm28557A0A087WQQ0 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm28557A0A087WQQ0 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.72■□□□□ 0.43
Gm28557A0A087WQQ0 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC17.72■□□□□ 0.43
Gm28557A0A087WQQ0 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC17.72■□□□□ 0.43
Gm28557A0A087WQQ0 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC17.72■□□□□ 0.43
Gm28557A0A087WQQ0 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm28557A0A087WQQ0 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gm28557A0A087WQQ0 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gm28557A0A087WQQ0 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Gm28557A0A087WQQ0 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gm28557A0A087WQQ0 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Gm28557A0A087WQQ0 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gm28557A0A087WQQ0 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Gm28557A0A087WQQ0 Cap2-205ENSMUST00000225824 1634 ntBASIC17.71■□□□□ 0.43
Gm28557A0A087WQQ0 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gm28557A0A087WQQ0 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Gm28557A0A087WQQ0 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Gm28557A0A087WQQ0 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Gm28557A0A087WQQ0 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Gm28557A0A087WQQ0 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm28557A0A087WQQ0 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Gm28557A0A087WQQ0 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm28557A0A087WQQ0 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm28557A0A087WQQ0 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.7■□□□□ 0.42
Gm28557A0A087WQQ0 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm28557A0A087WQQ0 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.69■□□□□ 0.42
Gm28557A0A087WQQ0 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm28557A0A087WQQ0 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm28557A0A087WQQ0 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm28557A0A087WQQ0 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm28557A0A087WQQ0 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm28557A0A087WQQ0 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Gm28557A0A087WQQ0 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm28557A0A087WQQ0 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm28557A0A087WQQ0 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm28557A0A087WQQ0 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm28557A0A087WQQ0 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm28557A0A087WQQ0 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Gm28557A0A087WQQ0 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Gm28557A0A087WQQ0 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm28557A0A087WQQ0 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm28557A0A087WQQ0 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Gm28557A0A087WQQ0 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Gm28557A0A087WQQ0 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Gm28557A0A087WQQ0 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Gm28557A0A087WQQ0 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Gm28557A0A087WQQ0 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.67■□□□□ 0.42
Gm28557A0A087WQQ0 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm28557A0A087WQQ0 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm28557A0A087WQQ0 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Gm28557A0A087WQQ0 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm28557A0A087WQQ0 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Gm28557A0A087WQQ0 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.67■□□□□ 0.42
Gm28557A0A087WQQ0 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
Gm28557A0A087WQQ0 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm28557A0A087WQQ0 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm28557A0A087WQQ0 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm28557A0A087WQQ0 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm28557A0A087WQQ0 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Gm28557A0A087WQQ0 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm28557A0A087WQQ0 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm28557A0A087WQQ0 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm28557A0A087WQQ0 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm28557A0A087WQQ0 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm28557A0A087WQQ0 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Gm28557A0A087WQQ0 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC17.66■□□□□ 0.42
Gm28557A0A087WQQ0 Gm5921-201ENSMUST00000075898 882 ntBASIC17.66■□□□□ 0.42
Gm28557A0A087WQQ0 Gm10232-201ENSMUST00000089221 720 ntBASIC17.66■□□□□ 0.42
Gm28557A0A087WQQ0 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm28557A0A087WQQ0 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
Gm28557A0A087WQQ0 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Gm28557A0A087WQQ0 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm28557A0A087WQQ0 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm28557A0A087WQQ0 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm28557A0A087WQQ0 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm28557A0A087WQQ0 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm28557A0A087WQQ0 Mir6236-201ENSMUST00000184437 123 ntBASIC17.65■□□□□ 0.42
Gm28557A0A087WQQ0 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Gm28557A0A087WQQ0 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm28557A0A087WQQ0 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms