Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav5-4A0A075B652 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Trav5-4A0A075B652 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav5-4A0A075B652 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav5-4A0A075B652 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Trav5-4A0A075B652 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trav5-4A0A075B652 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Trav5-4A0A075B652 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav5-4A0A075B652 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav5-4A0A075B652 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC16.39■□□□□ 0.21
Trav5-4A0A075B652 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC16.39■□□□□ 0.21
Trav5-4A0A075B652 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Trav5-4A0A075B652 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav5-4A0A075B652 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav5-4A0A075B652 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav5-4A0A075B652 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav5-4A0A075B652 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav5-4A0A075B652 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC16.38■□□□□ 0.21
Trav5-4A0A075B652 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Trav5-4A0A075B652 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav5-4A0A075B652 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav5-4A0A075B652 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav5-4A0A075B652 Gm43530-201ENSMUST00000195920 274 ntBASIC16.38■□□□□ 0.21
Trav5-4A0A075B652 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC16.38■□□□□ 0.21
Trav5-4A0A075B652 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav5-4A0A075B652 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav5-4A0A075B652 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav5-4A0A075B652 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav5-4A0A075B652 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav5-4A0A075B652 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Trav5-4A0A075B652 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav5-4A0A075B652 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav5-4A0A075B652 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Trav5-4A0A075B652 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC16.37■□□□□ 0.21
Trav5-4A0A075B652 Gm10657-201ENSMUST00000193528 1031 ntBASIC16.37■□□□□ 0.21
Trav5-4A0A075B652 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav5-4A0A075B652 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Trav5-4A0A075B652 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Trav5-4A0A075B652 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav5-4A0A075B652 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.37■□□□□ 0.21
Trav5-4A0A075B652 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav5-4A0A075B652 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav5-4A0A075B652 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trav5-4A0A075B652 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav5-4A0A075B652 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav5-4A0A075B652 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav5-4A0A075B652 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav5-4A0A075B652 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav5-4A0A075B652 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav5-4A0A075B652 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC16.36■□□□□ 0.21
Trav5-4A0A075B652 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav5-4A0A075B652 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC16.36■□□□□ 0.21
Trav5-4A0A075B652 Mir6236-201ENSMUST00000184437 123 ntBASIC16.36■□□□□ 0.21
Trav5-4A0A075B652 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC16.36■□□□□ 0.21
Trav5-4A0A075B652 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC16.36■□□□□ 0.21
Trav5-4A0A075B652 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav5-4A0A075B652 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Trav5-4A0A075B652 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Trav5-4A0A075B652 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC16.36■□□□□ 0.21
Trav5-4A0A075B652 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Trav5-4A0A075B652 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav5-4A0A075B652 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav5-4A0A075B652 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav5-4A0A075B652 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav5-4A0A075B652 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav5-4A0A075B652 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav5-4A0A075B652 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav5-4A0A075B652 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav5-4A0A075B652 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav5-4A0A075B652 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav5-4A0A075B652 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trav5-4A0A075B652 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trav5-4A0A075B652 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav5-4A0A075B652 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
Trav5-4A0A075B652 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC16.35■□□□□ 0.21
Trav5-4A0A075B652 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trav5-4A0A075B652 Gm22238-201ENSMUST00000175222 88 ntBASIC16.35■□□□□ 0.21
Trav5-4A0A075B652 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav5-4A0A075B652 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
Trav5-4A0A075B652 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav5-4A0A075B652 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav5-4A0A075B652 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Trav5-4A0A075B652 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.34■□□□□ 0.21
Trav5-4A0A075B652 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav5-4A0A075B652 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav5-4A0A075B652 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav5-4A0A075B652 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
Trav5-4A0A075B652 Gm5112-201ENSMUST00000204407 2368 ntBASIC16.34■□□□□ 0.21
Trav5-4A0A075B652 Gm43909-201ENSMUST00000203443 1876 ntBASIC16.34■□□□□ 0.21
Trav5-4A0A075B652 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC16.34■□□□□ 0.21
Trav5-4A0A075B652 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav5-4A0A075B652 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav5-4A0A075B652 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav5-4A0A075B652 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav5-4A0A075B652 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav5-4A0A075B652 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav5-4A0A075B652 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav5-4A0A075B652 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav5-4A0A075B652 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC16.33■□□□□ 0.2
Trav5-4A0A075B652 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms