Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13-2A0A075B649 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13-2A0A075B649 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC13.25□□□□□ -0.29
Trav13-2A0A075B649 Gm5786-201ENSMUST00000085368 882 ntBASIC13.25□□□□□ -0.29
Trav13-2A0A075B649 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13-2A0A075B649 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13-2A0A075B649 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13-2A0A075B649 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13-2A0A075B649 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC13.25□□□□□ -0.29
Trav13-2A0A075B649 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
Trav13-2A0A075B649 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13-2A0A075B649 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13-2A0A075B649 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13-2A0A075B649 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13-2A0A075B649 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13-2A0A075B649 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13-2A0A075B649 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13-2A0A075B649 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav13-2A0A075B649 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13-2A0A075B649 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC13.24□□□□□ -0.29
Trav13-2A0A075B649 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13-2A0A075B649 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trav13-2A0A075B649 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13-2A0A075B649 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13-2A0A075B649 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trav13-2A0A075B649 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trav13-2A0A075B649 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13-2A0A075B649 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
Trav13-2A0A075B649 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trav13-2A0A075B649 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13-2A0A075B649 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13-2A0A075B649 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13-2A0A075B649 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13-2A0A075B649 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13-2A0A075B649 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trav13-2A0A075B649 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13-2A0A075B649 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13-2A0A075B649 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13-2A0A075B649 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13-2A0A075B649 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13-2A0A075B649 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13-2A0A075B649 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13-2A0A075B649 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trav13-2A0A075B649 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13-2A0A075B649 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13-2A0A075B649 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13-2A0A075B649 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trav13-2A0A075B649 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13-2A0A075B649 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trav13-2A0A075B649 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC13.22□□□□□ -0.29
Trav13-2A0A075B649 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13-2A0A075B649 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13-2A0A075B649 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13-2A0A075B649 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13-2A0A075B649 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13-2A0A075B649 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13-2A0A075B649 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13-2A0A075B649 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC13.21□□□□□ -0.29
Trav13-2A0A075B649 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13-2A0A075B649 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC13.21□□□□□ -0.29
Trav13-2A0A075B649 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13-2A0A075B649 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Trav13-2A0A075B649 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13-2A0A075B649 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13-2A0A075B649 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13-2A0A075B649 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trav13-2A0A075B649 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trav13-2A0A075B649 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav13-2A0A075B649 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav13-2A0A075B649 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav13-2A0A075B649 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13-2A0A075B649 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13-2A0A075B649 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13-2A0A075B649 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
Trav13-2A0A075B649 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13-2A0A075B649 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13-2A0A075B649 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13-2A0A075B649 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13-2A0A075B649 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC13.2□□□□□ -0.3
Trav13-2A0A075B649 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13-2A0A075B649 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13-2A0A075B649 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13-2A0A075B649 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13-2A0A075B649 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13-2A0A075B649 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trav13-2A0A075B649 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trav13-2A0A075B649 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Trav13-2A0A075B649 Gm5067-201ENSMUST00000170449 1009 ntBASIC13.19□□□□□ -0.3
Trav13-2A0A075B649 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13-2A0A075B649 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13-2A0A075B649 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13-2A0A075B649 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13-2A0A075B649 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13-2A0A075B649 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13-2A0A075B649 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13-2A0A075B649 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Trav13-2A0A075B649 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13-2A0A075B649 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13-2A0A075B649 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13-2A0A075B649 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms