Protein–RNA interactions for Protein: A0A075B625

Trav4d-3, T cell receptor alpha variable 4D-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4d-3A0A075B625 AC126028.2-201ENSMUST00000228100 1833 ntBASIC13.43□□□□□ -0.26
Trav4d-3A0A075B625 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav4d-3A0A075B625 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
Trav4d-3A0A075B625 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
Trav4d-3A0A075B625 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC13.43□□□□□ -0.26
Trav4d-3A0A075B625 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav4d-3A0A075B625 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav4d-3A0A075B625 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav4d-3A0A075B625 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav4d-3A0A075B625 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav4d-3A0A075B625 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav4d-3A0A075B625 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav4d-3A0A075B625 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav4d-3A0A075B625 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav4d-3A0A075B625 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav4d-3A0A075B625 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav4d-3A0A075B625 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav4d-3A0A075B625 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Trav4d-3A0A075B625 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trav4d-3A0A075B625 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC13.42□□□□□ -0.26
Trav4d-3A0A075B625 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav4d-3A0A075B625 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Trav4d-3A0A075B625 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav4d-3A0A075B625 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav4d-3A0A075B625 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav4d-3A0A075B625 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
Trav4d-3A0A075B625 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav4d-3A0A075B625 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav4d-3A0A075B625 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav4d-3A0A075B625 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav4d-3A0A075B625 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Trav4d-3A0A075B625 Gm5540-201ENSMUST00000131852 1848 ntBASIC13.41□□□□□ -0.26
Trav4d-3A0A075B625 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav4d-3A0A075B625 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav4d-3A0A075B625 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Trav4d-3A0A075B625 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav4d-3A0A075B625 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav4d-3A0A075B625 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav4d-3A0A075B625 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav4d-3A0A075B625 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav4d-3A0A075B625 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Trav4d-3A0A075B625 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC13.41□□□□□ -0.26
Trav4d-3A0A075B625 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav4d-3A0A075B625 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav4d-3A0A075B625 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav4d-3A0A075B625 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav4d-3A0A075B625 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav4d-3A0A075B625 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav4d-3A0A075B625 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav4d-3A0A075B625 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Trav4d-3A0A075B625 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav4d-3A0A075B625 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav4d-3A0A075B625 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav4d-3A0A075B625 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav4d-3A0A075B625 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav4d-3A0A075B625 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav4d-3A0A075B625 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav4d-3A0A075B625 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav4d-3A0A075B625 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Trav4d-3A0A075B625 Pkd1-207ENSMUST00000228550 1050 ntBASIC13.4□□□□□ -0.26
Trav4d-3A0A075B625 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
Trav4d-3A0A075B625 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav4d-3A0A075B625 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Trav4d-3A0A075B625 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav4d-3A0A075B625 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.27
Trav4d-3A0A075B625 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Trav4d-3A0A075B625 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav4d-3A0A075B625 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav4d-3A0A075B625 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav4d-3A0A075B625 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav4d-3A0A075B625 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav4d-3A0A075B625 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC13.39□□□□□ -0.27
Trav4d-3A0A075B625 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav4d-3A0A075B625 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trav4d-3A0A075B625 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav4d-3A0A075B625 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Trav4d-3A0A075B625 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav4d-3A0A075B625 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC13.38□□□□□ -0.27
Trav4d-3A0A075B625 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav4d-3A0A075B625 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trav4d-3A0A075B625 Shroom3-211ENSMUST00000225438 5742 ntBASIC13.38□□□□□ -0.27
Trav4d-3A0A075B625 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trav4d-3A0A075B625 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav4d-3A0A075B625 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav4d-3A0A075B625 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav4d-3A0A075B625 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav4d-3A0A075B625 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav4d-3A0A075B625 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav4d-3A0A075B625 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav4d-3A0A075B625 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav4d-3A0A075B625 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav4d-3A0A075B625 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav4d-3A0A075B625 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav4d-3A0A075B625 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trav4d-3A0A075B625 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav4d-3A0A075B625 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav4d-3A0A075B625 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trav4d-3A0A075B625 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav4d-3A0A075B625 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav4d-3A0A075B625 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms