Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC8.53□□□□□ -1.04
Npas1P97459 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC8.53□□□□□ -1.04
Npas1P97459 Gm5186-201ENSMUST00000218781 920 ntBASIC8.53□□□□□ -1.04
Npas1P97459 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC8.53□□□□□ -1.04
Npas1P97459 AC154435.1-201ENSMUST00000223938 959 ntBASIC8.53□□□□□ -1.04
Npas1P97459 AC157650.1-201ENSMUST00000224582 610 ntBASIC8.53□□□□□ -1.04
Npas1P97459 AC122350.1-201ENSMUST00000228135 533 ntBASIC8.53□□□□□ -1.04
Npas1P97459 Magoh-201ENSMUST00000030348 692 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Npas1P97459 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Npas1P97459 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Npas1P97459 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Npas1P97459 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Npas1P97459 Gm5879-201ENSMUST00000089501 1209 ntBASIC8.53□□□□□ -1.04
Npas1P97459 Eif2d-203ENSMUST00000112446 2153 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
Npas1P97459 Gm13498-201ENSMUST00000119159 2166 ntBASIC8.53□□□□□ -1.04
Npas1P97459 Gm28898-201ENSMUST00000189604 2167 ntTSL 5 BASIC8.53□□□□□ -1.04
Npas1P97459 Zfp532-201ENSMUST00000049016 5503 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Npas1P97459 Gm17249-201ENSMUST00000181277 3500 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Npas1P97459 Rbbp4-201ENSMUST00000102598 4407 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Npas1P97459 Tmprss11c-201ENSMUST00000059424 1615 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Npas1P97459 Btnl6-201ENSMUST00000075483 1620 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Npas1P97459 Itpripl1-202ENSMUST00000132773 3424 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Npas1P97459 Metap2-210ENSMUST00000181217 1984 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Npas1P97459 Khdc1a-201ENSMUST00000088407 1987 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Npas1P97459 Clasp1-205ENSMUST00000185405 4597 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
Npas1P97459 Ccdc14-201ENSMUST00000023532 4107 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Npas1P97459 Slc17a2-202ENSMUST00000099697 1893 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
Npas1P97459 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Npas1P97459 Babam2-201ENSMUST00000063813 1410 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Npas1P97459 Gm8049-201ENSMUST00000214336 1782 ntBASIC8.53□□□□□ -1.04
Npas1P97459 Cald1-204ENSMUST00000115026 4080 ntTSL 5 BASIC8.53□□□□□ -1.04
Npas1P97459 Nrp2-206ENSMUST00000114157 6357 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Npas1P97459 Ndst3-206ENSMUST00000154668 5570 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Npas1P97459 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Npas1P97459 4933415A04Rik-201ENSMUST00000056256 2009 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Npas1P97459 Col6a1-201ENSMUST00000001147 4100 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
Npas1P97459 Cdk12-201ENSMUST00000003203 4837 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.04
Npas1P97459 Gtf2i-223ENSMUST00000174513 4021 ntAPPRIS ALT2 TSL 2 BASIC8.52□□□□□ -1.04
Npas1P97459 Gm26637-201ENSMUST00000180880 2289 ntTSL 1 (best) BASIC8.52□□□□□ -1.04
Npas1P97459 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC8.52□□□□□ -1.05
Npas1P97459 Gm3712-201ENSMUST00000118523 2071 ntBASIC8.52□□□□□ -1.05
Npas1P97459 Cd300e-201ENSMUST00000062787 2088 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Npas1P97459 Acbd5-202ENSMUST00000114523 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Npas1P97459 Cse1l-201ENSMUST00000002790 3641 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Npas1P97459 Zfp354a-201ENSMUST00000020628 1719 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
Npas1P97459 Gm37593-201ENSMUST00000191669 3254 ntBASIC8.52□□□□□ -1.05
Npas1P97459 Lama5-201ENSMUST00000015791 11388 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Npas1P97459 Ppfia1-202ENSMUST00000182226 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Npas1P97459 Gm38413-202ENSMUST00000198449 2348 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Npas1P97459 Nav2-216ENSMUST00000184945 10665 ntAPPRIS P4 TSL 5 BASIC8.52□□□□□ -1.05
Npas1P97459 Bcas1-201ENSMUST00000013667 2916 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
Npas1P97459 Acot11-201ENSMUST00000065253 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Npas1P97459 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC8.52□□□□□ -1.05
Npas1P97459 Kif2a-206ENSMUST00000159772 2570 ntTSL 5 BASIC8.52□□□□□ -1.05
Npas1P97459 Gm232-201ENSMUST00000216549 2559 ntBASIC8.52□□□□□ -1.05
Npas1P97459 Aftph-209ENSMUST00000177543 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Npas1P97459 Zfp229-201ENSMUST00000065871 4525 ntAPPRIS P1 TSL 3 BASIC8.52□□□□□ -1.05
Npas1P97459 Ttll1-203ENSMUST00000109480 1876 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Npas1P97459 Foxp3-201ENSMUST00000045566 3572 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Npas1P97459 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Npas1P97459 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Npas1P97459 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC8.52□□□□□ -1.05
Npas1P97459 Prokr2-202ENSMUST00000110156 3829 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Npas1P97459 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.05
Npas1P97459 Gm11380-201ENSMUST00000118067 560 ntBASIC8.52□□□□□ -1.05
Npas1P97459 Gm11489-201ENSMUST00000118342 499 ntBASIC8.52□□□□□ -1.05
Npas1P97459 Gm11952-201ENSMUST00000121172 821 ntBASIC8.52□□□□□ -1.05
Npas1P97459 Gm8737-201ENSMUST00000122208 642 ntBASIC8.52□□□□□ -1.05
Npas1P97459 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC8.52□□□□□ -1.05
Npas1P97459 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC8.52□□□□□ -1.05
Npas1P97459 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Npas1P97459 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Npas1P97459 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC8.52□□□□□ -1.05
Npas1P97459 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC8.52□□□□□ -1.05
Npas1P97459 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC8.52□□□□□ -1.05
Npas1P97459 Gm18466-201ENSMUST00000209147 499 ntBASIC8.52□□□□□ -1.05
Npas1P97459 Gm7594-201ENSMUST00000218595 871 ntBASIC8.52□□□□□ -1.05
Npas1P97459 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.05
Npas1P97459 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Npas1P97459 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Npas1P97459 Lipe-204ENSMUST00000149349 3713 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
Npas1P97459 Synm-203ENSMUST00000207102 3388 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Npas1P97459 Rhbdd1-201ENSMUST00000027322 3636 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Npas1P97459 Cacna1c-222ENSMUST00000190285 6585 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Npas1P97459 Olfr173-202ENSMUST00000206205 2778 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.05
Npas1P97459 Armcx5-201ENSMUST00000096321 2779 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Npas1P97459 Oacyl-202ENSMUST00000117694 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Npas1P97459 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC8.52□□□□□ -1.05
Npas1P97459 Atf7-203ENSMUST00000169033 2165 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Npas1P97459 Gm7435-202ENSMUST00000216003 2424 ntBASIC8.52□□□□□ -1.05
Npas1P97459 Opn1sw-201ENSMUST00000080428 2410 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Npas1P97459 D030018L15Rik-203ENSMUST00000140253 2902 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Npas1P97459 Chd2-203ENSMUST00000169922 9085 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Npas1P97459 Pitrm1-201ENSMUST00000021611 3318 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Npas1P97459 Stat1-205ENSMUST00000186574 2834 ntAPPRIS ALT1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Npas1P97459 Harbi1-201ENSMUST00000090608 2308 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Npas1P97459 Fgf13-202ENSMUST00000119306 2091 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Npas1P97459 Rufy3-202ENSMUST00000196686 2077 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Npas1P97459 Sypl-202ENSMUST00000076698 4999 ntAPPRIS P4 TSL 1 (best) BASIC8.52□□□□□ -1.05
Npas1P97459 Fcgr2b-204ENSMUST00000159969 1578 ntAPPRIS P4 TSL 1 (best) BASIC8.52□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms