Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Spg11Q3UHA3 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC9.46□□□□□ -0.89
Spg11Q3UHA3 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Spg11Q3UHA3 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Spg11Q3UHA3 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC9.46□□□□□ -0.89
Spg11Q3UHA3 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Spg11Q3UHA3 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Spg11Q3UHA3 Gm10408-201ENSMUST00000096168 1512 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Spg11Q3UHA3 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Spg11Q3UHA3 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
Spg11Q3UHA3 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.9
Spg11Q3UHA3 BC021767-202ENSMUST00000136988 905 ntTSL 3 BASIC9.46□□□□□ -0.9
Spg11Q3UHA3 Gm8625-201ENSMUST00000194185 1077 ntBASIC9.46□□□□□ -0.9
Spg11Q3UHA3 Gm42464-202ENSMUST00000198111 774 ntBASIC9.46□□□□□ -0.9
Spg11Q3UHA3 Fcer2a-207ENSMUST00000208492 1053 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Spg11Q3UHA3 Gm18129-201ENSMUST00000208834 1044 ntBASIC9.46□□□□□ -0.9
Spg11Q3UHA3 AC167202.2-201ENSMUST00000220155 296 ntBASIC9.46□□□□□ -0.9
Spg11Q3UHA3 Gm2915-201ENSMUST00000222565 787 ntBASIC9.46□□□□□ -0.9
Spg11Q3UHA3 Olfr523-201ENSMUST00000055890 1056 ntAPPRIS P2 BASIC9.46□□□□□ -0.9
Spg11Q3UHA3 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Spg11Q3UHA3 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Spg11Q3UHA3 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Spg11Q3UHA3 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Spg11Q3UHA3 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Spg11Q3UHA3 Tnfrsf22-204ENSMUST00000171066 1780 ntBASIC9.46□□□□□ -0.9
Spg11Q3UHA3 Atp5g1-204ENSMUST00000178611 4660 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Spg11Q3UHA3 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Spg11Q3UHA3 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
Spg11Q3UHA3 Zeb2-214ENSMUST00000177302 4020 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Spg11Q3UHA3 Cog5-201ENSMUST00000036862 2997 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Spg11Q3UHA3 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Spg11Q3UHA3 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC9.45□□□□□ -0.9
Spg11Q3UHA3 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Spg11Q3UHA3 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Spg11Q3UHA3 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Spg11Q3UHA3 Hbq1b-201ENSMUST00000101387 562 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Spg11Q3UHA3 Cuta-202ENSMUST00000114935 597 ntAPPRIS ALT1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Spg11Q3UHA3 Gm8310-201ENSMUST00000117526 1193 ntBASIC9.45□□□□□ -0.9
Spg11Q3UHA3 Cfap100-205ENSMUST00000135757 289 ntTSL 5 BASIC9.45□□□□□ -0.9
Spg11Q3UHA3 Gm15942-201ENSMUST00000136305 810 ntTSL 5 BASIC9.45□□□□□ -0.9
Spg11Q3UHA3 Gm16226-204ENSMUST00000162639 423 ntTSL 3 BASIC9.45□□□□□ -0.9
Spg11Q3UHA3 1110002O04Rik-201ENSMUST00000194261 566 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Spg11Q3UHA3 Iglc1-201ENSMUST00000200568 454 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Spg11Q3UHA3 Gm32591-201ENSMUST00000203038 414 ntTSL 3 BASIC9.45□□□□□ -0.9
Spg11Q3UHA3 Rpl18a-ps4-201ENSMUST00000206176 536 ntBASIC9.45□□□□□ -0.9
Spg11Q3UHA3 CT009509.1-201ENSMUST00000223855 466 ntBASIC9.45□□□□□ -0.9
Spg11Q3UHA3 Reg4-201ENSMUST00000029469 1021 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Spg11Q3UHA3 n-R5s74-201ENSMUST00000082654 116 ntBASIC9.45□□□□□ -0.9
Spg11Q3UHA3 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Spg11Q3UHA3 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
Spg11Q3UHA3 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Spg11Q3UHA3 Eif3l-201ENSMUST00000040518 1893 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Spg11Q3UHA3 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC9.45□□□□□ -0.9
Spg11Q3UHA3 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Spg11Q3UHA3 Sncaip-210ENSMUST00000179689 1512 ntTSL 5 BASIC9.45□□□□□ -0.9
Spg11Q3UHA3 Gm44746-201ENSMUST00000205565 1349 ntBASIC9.45□□□□□ -0.9
Spg11Q3UHA3 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Spg11Q3UHA3 Sh3bgrl2-204ENSMUST00000188241 3155 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Spg11Q3UHA3 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Spg11Q3UHA3 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Spg11Q3UHA3 2900011O08Rik-201ENSMUST00000056521 2394 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Spg11Q3UHA3 Mut-201ENSMUST00000169611 3675 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Spg11Q3UHA3 Cdcp2-201ENSMUST00000062495 2611 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Spg11Q3UHA3 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Spg11Q3UHA3 Gm14504-201ENSMUST00000119391 1497 ntBASIC9.45□□□□□ -0.9
Spg11Q3UHA3 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Spg11Q3UHA3 Gm53-204ENSMUST00000150490 3257 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Spg11Q3UHA3 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Spg11Q3UHA3 Elavl2-206ENSMUST00000107116 1282 ntTSL 5 BASIC9.45□□□□□ -0.9
Spg11Q3UHA3 S100a16-203ENSMUST00000107331 723 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
Spg11Q3UHA3 Gm14044-201ENSMUST00000117531 447 ntBASIC9.45□□□□□ -0.9
Spg11Q3UHA3 Gm13450-201ENSMUST00000121107 167 ntBASIC9.45□□□□□ -0.9
Spg11Q3UHA3 Gm12702-201ENSMUST00000123258 612 ntTSL 3 BASIC9.45□□□□□ -0.9
Spg11Q3UHA3 Gm12121-201ENSMUST00000131630 500 ntTSL 3 BASIC9.45□□□□□ -0.9
Spg11Q3UHA3 Taz-213ENSMUST00000135504 747 ntTSL 5 BASIC9.45□□□□□ -0.9
Spg11Q3UHA3 Gm12927-201ENSMUST00000150252 373 ntTSL 2 BASIC9.45□□□□□ -0.9
Spg11Q3UHA3 Tpsab1-202ENSMUST00000153118 1156 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Spg11Q3UHA3 Gm24307-201ENSMUST00000178512 101 ntBASIC9.45□□□□□ -0.9
Spg11Q3UHA3 Hcfc1r1-202ENSMUST00000179928 597 ntAPPRIS ALT2 TSL 3 BASIC9.45□□□□□ -0.9
Spg11Q3UHA3 2900076A07Rik-201ENSMUST00000180385 914 ntTSL 3 BASIC9.45□□□□□ -0.9
Spg11Q3UHA3 Gm26739-201ENSMUST00000181041 427 ntTSL 3 BASIC9.45□□□□□ -0.9
Spg11Q3UHA3 2900076A07Rik-207ENSMUST00000181492 720 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Spg11Q3UHA3 Gm27913-201ENSMUST00000184473 173 ntBASIC9.45□□□□□ -0.9
Spg11Q3UHA3 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Spg11Q3UHA3 Rab38-202ENSMUST00000208478 579 ntTSL 3 BASIC9.45□□□□□ -0.9
Spg11Q3UHA3 Gm39662-201ENSMUST00000211909 1227 ntTSL 5 BASIC9.45□□□□□ -0.9
Spg11Q3UHA3 AC157570.2-201ENSMUST00000219091 700 ntBASIC9.45□□□□□ -0.9
Spg11Q3UHA3 AC157772.1-201ENSMUST00000226266 365 ntBASIC9.45□□□□□ -0.9
Spg11Q3UHA3 Gm826-201ENSMUST00000099127 637 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Spg11Q3UHA3 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Spg11Q3UHA3 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Spg11Q3UHA3 Acp1-202ENSMUST00000074038 2754 ntAPPRIS ALT1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Spg11Q3UHA3 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Spg11Q3UHA3 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Spg11Q3UHA3 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Spg11Q3UHA3 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Spg11Q3UHA3 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Spg11Q3UHA3 Ces1a-201ENSMUST00000095211 1980 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Spg11Q3UHA3 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Spg11Q3UHA3 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC9.45□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms