Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Ddx6P54823 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ddx6P54823 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ddx6P54823 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ddx6P54823 4933436P19Rik-201ENSMUST00000217736 1442 ntBASIC10.46□□□□□ -0.74
Ddx6P54823 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC10.46□□□□□ -0.74
Ddx6P54823 Rsrc2-208ENSMUST00000182309 1595 ntTSL 5 BASIC10.46□□□□□ -0.74
Ddx6P54823 Ufsp2-201ENSMUST00000034051 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ddx6P54823 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Ddx6P54823 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ddx6P54823 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.74
Ddx6P54823 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ddx6P54823 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC10.46□□□□□ -0.74
Ddx6P54823 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Ddx6P54823 Loxl3-202ENSMUST00000101257 3252 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Ddx6P54823 Cers3-201ENSMUST00000066475 3250 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Ddx6P54823 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ddx6P54823 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Ddx6P54823 Ank3-242ENSMUST00000183261 4999 ntTSL 5 BASIC10.46□□□□□ -0.74
Ddx6P54823 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ddx6P54823 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ddx6P54823 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Ddx6P54823 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Ddx6P54823 Mak-203ENSMUST00000165087 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ddx6P54823 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ddx6P54823 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Ddx6P54823 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ddx6P54823 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Ddx6P54823 Acp1-202ENSMUST00000074038 2754 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ddx6P54823 Mx1-202ENSMUST00000113768 2695 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Ddx6P54823 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Ddx6P54823 Wdr95-207ENSMUST00000202902 2574 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Ddx6P54823 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ddx6P54823 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Ddx6P54823 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
Ddx6P54823 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ddx6P54823 2210010C04Rik-201ENSMUST00000031931 2142 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ddx6P54823 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Ddx6P54823 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ddx6P54823 9530059O14Rik-201ENSMUST00000181107 3978 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Ddx6P54823 Ighv6-3-201ENSMUST00000103486 356 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Ddx6P54823 Ighv6-6-201ENSMUST00000103489 357 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Ddx6P54823 Gm24161-201ENSMUST00000104592 130 ntBASIC10.45□□□□□ -0.74
Ddx6P54823 Tnnt3-213ENSMUST00000105952 1040 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ddx6P54823 Tnnt3-214ENSMUST00000105953 1049 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ddx6P54823 Tnnt3-215ENSMUST00000105954 1052 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ddx6P54823 Tnnt3-216ENSMUST00000105955 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ddx6P54823 Tnnt3-218ENSMUST00000105958 1050 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ddx6P54823 Gm7781-201ENSMUST00000117258 788 ntBASIC10.45□□□□□ -0.74
Ddx6P54823 Gm13215-201ENSMUST00000117559 472 ntBASIC10.45□□□□□ -0.74
Ddx6P54823 Gm15373-201ENSMUST00000121495 214 ntBASIC10.45□□□□□ -0.74
Ddx6P54823 Gm13629-201ENSMUST00000141149 1022 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Ddx6P54823 Gm9117-201ENSMUST00000177735 1098 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Ddx6P54823 Tnnt3-225ENSMUST00000179658 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ddx6P54823 Rhox12-203ENSMUST00000183737 761 ntTSL 3 BASIC10.45□□□□□ -0.74
Ddx6P54823 AC157931.1-201ENSMUST00000198565 346 ntAPPRIS P1 TSL 3 BASIC10.45□□□□□ -0.74
Ddx6P54823 Gm44139-201ENSMUST00000204903 373 ntBASIC10.45□□□□□ -0.74
Ddx6P54823 Gimd1-205ENSMUST00000212852 1234 ntTSL 5 BASIC10.45□□□□□ -0.74
Ddx6P54823 Gm8960-201ENSMUST00000219787 788 ntBASIC10.45□□□□□ -0.74
Ddx6P54823 Arhgef33-210ENSMUST00000225548 456 ntBASIC10.45□□□□□ -0.74
Ddx6P54823 Tnnt3-202ENSMUST00000078497 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ddx6P54823 Speer4c-201ENSMUST00000095005 1159 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ddx6P54823 Speer4d-201ENSMUST00000095006 1194 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ddx6P54823 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ddx6P54823 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Ddx6P54823 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ddx6P54823 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ddx6P54823 Gm43817-201ENSMUST00000196459 2262 ntBASIC10.45□□□□□ -0.74
Ddx6P54823 Olfr1490-202ENSMUST00000213900 5165 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Ddx6P54823 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Ddx6P54823 Gm13498-201ENSMUST00000119159 2166 ntBASIC10.45□□□□□ -0.74
Ddx6P54823 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Ddx6P54823 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Ddx6P54823 AC125409.1-201ENSMUST00000223213 3370 ntBASIC10.45□□□□□ -0.74
Ddx6P54823 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ddx6P54823 Sdhc-202ENSMUST00000111336 3171 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ddx6P54823 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ddx6P54823 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ddx6P54823 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ddx6P54823 Anks1b-203ENSMUST00000099368 2799 ntTSL 5 BASIC10.44□□□□□ -0.74
Ddx6P54823 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ddx6P54823 Armc2-201ENSMUST00000095729 4855 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Ddx6P54823 Adcy7-202ENSMUST00000168545 5937 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ddx6P54823 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Ddx6P54823 Hat1-201ENSMUST00000028408 1576 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ddx6P54823 Gm15535-202ENSMUST00000148478 1519 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Ddx6P54823 Acsm5-205ENSMUST00000207440 2494 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ddx6P54823 Sgca-201ENSMUST00000100551 1465 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ddx6P54823 Dhdh-201ENSMUST00000011526 5323 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ddx6P54823 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ddx6P54823 Gm44547-201ENSMUST00000207793 1446 ntBASIC10.44□□□□□ -0.74
Ddx6P54823 Tmem106a-201ENSMUST00000039581 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ddx6P54823 Orc4-201ENSMUST00000028098 4066 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ddx6P54823 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Ddx6P54823 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Ddx6P54823 Cd74-203ENSMUST00000167610 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ddx6P54823 Gm12700-201ENSMUST00000118145 457 ntBASIC10.44□□□□□ -0.74
Ddx6P54823 1700026D11Rik-205ENSMUST00000151417 789 ntTSL 3 BASIC10.44□□□□□ -0.74
Ddx6P54823 Pcsk2os1-202ENSMUST00000156780 527 ntTSL 3 BASIC10.44□□□□□ -0.74
Ddx6P54823 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms