Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps54Q5SPW0 Skint7-202ENSMUST00000106568 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps54Q5SPW0 Ndufb5-202ENSMUST00000121778 574 ntTSL 3 BASIC12.3□□□□□ -0.44
Vps54Q5SPW0 Gm13554-201ENSMUST00000137349 477 ntTSL 5 BASIC12.3□□□□□ -0.44
Vps54Q5SPW0 Gm6471-202ENSMUST00000148734 587 ntTSL 2 BASIC12.3□□□□□ -0.44
Vps54Q5SPW0 Rps18-206ENSMUST00000174609 527 ntTSL 2 BASIC12.3□□□□□ -0.44
Vps54Q5SPW0 Gm28505-201ENSMUST00000190466 680 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Vps54Q5SPW0 Gm37976-201ENSMUST00000193827 345 ntBASIC12.3□□□□□ -0.44
Vps54Q5SPW0 Ckb-ps2-201ENSMUST00000198886 1001 ntBASIC12.3□□□□□ -0.44
Vps54Q5SPW0 Gm44540-201ENSMUST00000205640 354 ntBASIC12.3□□□□□ -0.44
Vps54Q5SPW0 AC154766.1-201ENSMUST00000226550 936 ntBASIC12.3□□□□□ -0.44
Vps54Q5SPW0 Gtf2i-222ENSMUST00000174354 4084 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
Vps54Q5SPW0 Rffl-201ENSMUST00000021036 1719 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Vps54Q5SPW0 Synpo2l-203ENSMUST00000119483 3696 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Vps54Q5SPW0 AC110091.2-201ENSMUST00000215107 1512 ntTSL 5 BASIC12.3□□□□□ -0.44
Vps54Q5SPW0 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps54Q5SPW0 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps54Q5SPW0 Ces1a-201ENSMUST00000095211 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps54Q5SPW0 Aoc1-201ENSMUST00000031835 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps54Q5SPW0 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps54Q5SPW0 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps54Q5SPW0 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC12.3□□□□□ -0.44
Vps54Q5SPW0 Dnajc10-201ENSMUST00000028392 4042 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps54Q5SPW0 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps54Q5SPW0 Slc10a4-202ENSMUST00000201304 1419 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Vps54Q5SPW0 AC166361.2-201ENSMUST00000219269 1415 ntBASIC12.29□□□□□ -0.44
Vps54Q5SPW0 Eng-205ENSMUST00000167841 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps54Q5SPW0 Gm42879-201ENSMUST00000198656 2214 ntBASIC12.29□□□□□ -0.44
Vps54Q5SPW0 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps54Q5SPW0 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Vps54Q5SPW0 Idua-201ENSMUST00000071650 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps54Q5SPW0 Slc7a3-203ENSMUST00000113710 2750 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Vps54Q5SPW0 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps54Q5SPW0 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Vps54Q5SPW0 Spata7-202ENSMUST00000101144 1541 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Vps54Q5SPW0 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC12.29□□□□□ -0.44
Vps54Q5SPW0 Gm6276-201ENSMUST00000120159 579 ntBASIC12.29□□□□□ -0.44
Vps54Q5SPW0 Gm16069-201ENSMUST00000131146 545 ntTSL 3 BASIC12.29□□□□□ -0.44
Vps54Q5SPW0 Gm15943-201ENSMUST00000147638 3821 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Vps54Q5SPW0 Gm15641-201ENSMUST00000161407 670 ntTSL 3 BASIC12.29□□□□□ -0.44
Vps54Q5SPW0 Pkib-204ENSMUST00000175852 731 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps54Q5SPW0 Gm11942-201ENSMUST00000180255 345 ntBASIC12.29□□□□□ -0.44
Vps54Q5SPW0 Ighv1-70-201ENSMUST00000196509 351 ntBASIC12.29□□□□□ -0.44
Vps54Q5SPW0 Gm43854-201ENSMUST00000200418 394 ntBASIC12.29□□□□□ -0.44
Vps54Q5SPW0 0610033M10Rik-202ENSMUST00000205236 1102 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Vps54Q5SPW0 AC132384.2-201ENSMUST00000218018 526 ntBASIC12.29□□□□□ -0.44
Vps54Q5SPW0 AC125409.3-201ENSMUST00000223488 653 ntBASIC12.29□□□□□ -0.44
Vps54Q5SPW0 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps54Q5SPW0 Olfr1394-201ENSMUST00000052668 939 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Vps54Q5SPW0 Rpl9-201ENSMUST00000057885 738 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps54Q5SPW0 Fcer1g-201ENSMUST00000079957 674 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps54Q5SPW0 Prok2-201ENSMUST00000008273 594 ntTSL 3 BASIC12.29□□□□□ -0.44
Vps54Q5SPW0 Gm4883-201ENSMUST00000085702 528 ntBASIC12.29□□□□□ -0.44
Vps54Q5SPW0 Cngb1-204ENSMUST00000121162 3336 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Vps54Q5SPW0 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps54Q5SPW0 Qtrt2-201ENSMUST00000023387 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps54Q5SPW0 Extl1-201ENSMUST00000030643 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps54Q5SPW0 Prkx-201ENSMUST00000036333 4146 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps54Q5SPW0 1700030K09Rik-201ENSMUST00000064853 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps54Q5SPW0 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Vps54Q5SPW0 Gramd1b-213ENSMUST00000211853 2659 ntTSL 5 BASIC12.29□□□□□ -0.44
Vps54Q5SPW0 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Vps54Q5SPW0 Gm15631-201ENSMUST00000142962 2436 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Vps54Q5SPW0 Kyat1-203ENSMUST00000113660 1388 ntTSL 5 BASIC12.29□□□□□ -0.44
Vps54Q5SPW0 Gm45837-201ENSMUST00000084894 4139 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Vps54Q5SPW0 Dhtkd1-201ENSMUST00000026924 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps54Q5SPW0 Cherp-207ENSMUST00000212991 3646 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps54Q5SPW0 Lpxn-201ENSMUST00000025601 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps54Q5SPW0 Rabgef1-201ENSMUST00000026390 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps54Q5SPW0 Zfp384-201ENSMUST00000046064 3108 ntTSL 5 BASIC12.28□□□□□ -0.44
Vps54Q5SPW0 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps54Q5SPW0 Rack1-201ENSMUST00000020640 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps54Q5SPW0 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps54Q5SPW0 Gpi1-201ENSMUST00000038027 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps54Q5SPW0 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps54Q5SPW0 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Vps54Q5SPW0 Limch1-201ENSMUST00000038188 5903 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Vps54Q5SPW0 Cyp4a12b-201ENSMUST00000094887 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps54Q5SPW0 Apex2-205ENSMUST00000112725 3613 ntTSL 5 BASIC12.28□□□□□ -0.44
Vps54Q5SPW0 Cdkal1-202ENSMUST00000091674 2427 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Vps54Q5SPW0 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Vps54Q5SPW0 Msln-201ENSMUST00000075884 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps54Q5SPW0 Gm498-202ENSMUST00000152910 1507 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Vps54Q5SPW0 Gm38116-201ENSMUST00000193873 1533 ntBASIC12.28□□□□□ -0.44
Vps54Q5SPW0 Ptk2b-203ENSMUST00000111121 3365 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Vps54Q5SPW0 Gtf2i-223ENSMUST00000174513 4021 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
Vps54Q5SPW0 Ldb3-205ENSMUST00000090040 4981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps54Q5SPW0 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps54Q5SPW0 Gm13002-201ENSMUST00000119286 682 ntBASIC12.28□□□□□ -0.44
Vps54Q5SPW0 Maats1os-201ENSMUST00000133496 326 ntTSL 3 BASIC12.28□□□□□ -0.44
Vps54Q5SPW0 St8sia3os-204ENSMUST00000140903 383 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Vps54Q5SPW0 Gm24078-201ENSMUST00000158184 103 ntBASIC12.28□□□□□ -0.44
Vps54Q5SPW0 Gm5766-202ENSMUST00000161633 799 ntBASIC12.28□□□□□ -0.44
Vps54Q5SPW0 Gm17799-201ENSMUST00000183270 667 ntBASIC12.28□□□□□ -0.44
Vps54Q5SPW0 Pf4-203ENSMUST00000202625 411 ntTSL 2 BASIC12.28□□□□□ -0.44
Vps54Q5SPW0 Gm33570-201ENSMUST00000207608 1254 ntTSL 5 BASIC12.28□□□□□ -0.44
Vps54Q5SPW0 Gm32098-201ENSMUST00000211305 479 ntTSL 5 BASIC12.28□□□□□ -0.44
Vps54Q5SPW0 Gm3889-201ENSMUST00000212467 612 ntBASIC12.28□□□□□ -0.44
Vps54Q5SPW0 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC12.28□□□□□ -0.44
Vps54Q5SPW0 Gm10617-201ENSMUST00000098368 1172 ntBASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 99.6 ms