Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Sec61a2Q9JLR1 Gm27953-201ENSMUST00000185171 143 ntBASIC9.3□□□□□ -0.92
Sec61a2Q9JLR1 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC9.3□□□□□ -0.92
Sec61a2Q9JLR1 Gm44304-201ENSMUST00000200509 145 ntBASIC9.3□□□□□ -0.92
Sec61a2Q9JLR1 Gm32296-201ENSMUST00000220590 1057 ntTSL 3 BASIC9.3□□□□□ -0.92
Sec61a2Q9JLR1 CT573086.4-201ENSMUST00000226729 342 ntBASIC9.3□□□□□ -0.92
Sec61a2Q9JLR1 Supt20-201ENSMUST00000029315 2112 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Sec61a2Q9JLR1 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Sec61a2Q9JLR1 Wdcp-201ENSMUST00000053034 2892 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Sec61a2Q9JLR1 Zfp672-201ENSMUST00000057836 2862 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Sec61a2Q9JLR1 Gm40634-201ENSMUST00000214129 2001 ntTSL 5 BASIC9.3□□□□□ -0.92
Sec61a2Q9JLR1 Myadm-202ENSMUST00000164553 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Sec61a2Q9JLR1 Exoc3l4-210ENSMUST00000223050 3418 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Sec61a2Q9JLR1 Gm10465-201ENSMUST00000223133 3334 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Sec61a2Q9JLR1 Cx3cl1-201ENSMUST00000034230 3315 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Sec61a2Q9JLR1 Elmo1-201ENSMUST00000072519 5464 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Sec61a2Q9JLR1 Mettl8-201ENSMUST00000090849 1842 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Sec61a2Q9JLR1 Adam22-202ENSMUST00000050166 8969 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Sec61a2Q9JLR1 Elmo3-201ENSMUST00000109375 3189 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Sec61a2Q9JLR1 4930488L21Rik-202ENSMUST00000212638 3164 ntTSL 5 BASIC9.3□□□□□ -0.92
Sec61a2Q9JLR1 Gm45597-201ENSMUST00000211524 1994 ntBASIC9.3□□□□□ -0.92
Sec61a2Q9JLR1 Nrros-204ENSMUST00000126869 2540 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Sec61a2Q9JLR1 Cipc-205ENSMUST00000187814 4098 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Sec61a2Q9JLR1 Cipc-201ENSMUST00000038369 4098 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Sec61a2Q9JLR1 Tiam1-201ENSMUST00000002588 7290 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Sec61a2Q9JLR1 Erbb4-202ENSMUST00000121473 12037 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Sec61a2Q9JLR1 Csnk2a1-201ENSMUST00000099224 4206 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Sec61a2Q9JLR1 Gm45719-201ENSMUST00000207954 1662 ntBASIC9.29□□□□□ -0.92
Sec61a2Q9JLR1 4930417O13Rik-203ENSMUST00000204911 3458 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Sec61a2Q9JLR1 Gm43517-201ENSMUST00000110746 3904 ntAPPRIS P1 TSL 2 BASIC9.29□□□□□ -0.92
Sec61a2Q9JLR1 Phf20-201ENSMUST00000037401 5737 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Sec61a2Q9JLR1 Cenpo-202ENSMUST00000111169 1550 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Sec61a2Q9JLR1 CT025645.2-201ENSMUST00000223278 3827 ntBASIC9.29□□□□□ -0.92
Sec61a2Q9JLR1 Zfp111-202ENSMUST00000073833 3079 ntAPPRIS P3 TSL 5 BASIC9.29□□□□□ -0.92
Sec61a2Q9JLR1 Gm33914-201ENSMUST00000214108 2150 ntTSL 5 BASIC9.29□□□□□ -0.92
Sec61a2Q9JLR1 Clip3-201ENSMUST00000014065 3300 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Sec61a2Q9JLR1 Nfya-202ENSMUST00000078800 3653 ntAPPRIS ALT1 TSL 5 BASIC9.29□□□□□ -0.92
Sec61a2Q9JLR1 Nod2-201ENSMUST00000054324 4719 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Sec61a2Q9JLR1 Wars-205ENSMUST00000161410 2764 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Sec61a2Q9JLR1 Cep112-201ENSMUST00000061287 3485 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Sec61a2Q9JLR1 Klrc2-202ENSMUST00000112057 1149 ntAPPRIS P4 TSL 1 (best) BASIC9.29□□□□□ -0.92
Sec61a2Q9JLR1 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Sec61a2Q9JLR1 Gm11801-201ENSMUST00000117807 746 ntBASIC9.29□□□□□ -0.92
Sec61a2Q9JLR1 Selenot-ps-201ENSMUST00000119098 593 ntBASIC9.29□□□□□ -0.92
Sec61a2Q9JLR1 Ccl19-ps1-201ENSMUST00000119621 327 ntBASIC9.29□□□□□ -0.92
Sec61a2Q9JLR1 Gm12969-201ENSMUST00000120199 1004 ntBASIC9.29□□□□□ -0.92
Sec61a2Q9JLR1 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Sec61a2Q9JLR1 Gm12962-202ENSMUST00000144212 691 ntTSL 2 BASIC9.29□□□□□ -0.92
Sec61a2Q9JLR1 4930471C04Rik-201ENSMUST00000166038 865 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Sec61a2Q9JLR1 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Sec61a2Q9JLR1 Gm37390-201ENSMUST00000192452 872 ntBASIC9.29□□□□□ -0.92
Sec61a2Q9JLR1 Gm8625-201ENSMUST00000194185 1077 ntBASIC9.29□□□□□ -0.92
Sec61a2Q9JLR1 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC9.29□□□□□ -0.92
Sec61a2Q9JLR1 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Sec61a2Q9JLR1 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC9.29□□□□□ -0.92
Sec61a2Q9JLR1 Gm43969-201ENSMUST00000204833 535 ntBASIC9.29□□□□□ -0.92
Sec61a2Q9JLR1 4930486N12Rik-201ENSMUST00000206668 632 ntBASIC9.29□□□□□ -0.92
Sec61a2Q9JLR1 Thyn1-202ENSMUST00000213683 1107 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Sec61a2Q9JLR1 AC157650.1-201ENSMUST00000224582 610 ntBASIC9.29□□□□□ -0.92
Sec61a2Q9JLR1 AC154361.2-201ENSMUST00000224747 943 ntBASIC9.29□□□□□ -0.92
Sec61a2Q9JLR1 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Sec61a2Q9JLR1 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Sec61a2Q9JLR1 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Sec61a2Q9JLR1 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Sec61a2Q9JLR1 Idua-202ENSMUST00000112563 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Sec61a2Q9JLR1 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Sec61a2Q9JLR1 Abcc5-204ENSMUST00000115547 5372 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Sec61a2Q9JLR1 Cxcr2-201ENSMUST00000027372 2220 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Sec61a2Q9JLR1 Dpp4-201ENSMUST00000047812 5268 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Sec61a2Q9JLR1 Slc25a44-204ENSMUST00000195657 3504 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Sec61a2Q9JLR1 Cd177-201ENSMUST00000063956 2714 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Sec61a2Q9JLR1 Ldlr-201ENSMUST00000034713 4627 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Sec61a2Q9JLR1 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Sec61a2Q9JLR1 Tbc1d31-201ENSMUST00000022992 3311 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Sec61a2Q9JLR1 Copb1-201ENSMUST00000033012 3346 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Sec61a2Q9JLR1 Rbbp6-201ENSMUST00000052135 6184 ntAPPRIS P2 TSL 5 BASIC9.29□□□□□ -0.92
Sec61a2Q9JLR1 Gm42449-201ENSMUST00000200349 2258 ntBASIC9.29□□□□□ -0.92
Sec61a2Q9JLR1 Ppp6r2-201ENSMUST00000088788 2887 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Sec61a2Q9JLR1 Prmt7-201ENSMUST00000071592 3472 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Sec61a2Q9JLR1 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Sec61a2Q9JLR1 Ggct-202ENSMUST00000131475 3960 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Sec61a2Q9JLR1 Babam2-202ENSMUST00000071531 1308 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Sec61a2Q9JLR1 Rbm27-202ENSMUST00000091920 6266 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Sec61a2Q9JLR1 Hcfc1-202ENSMUST00000114372 8262 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Sec61a2Q9JLR1 P4ha1-201ENSMUST00000009789 4043 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Sec61a2Q9JLR1 Zfp74-204ENSMUST00000108212 2060 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Sec61a2Q9JLR1 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Sec61a2Q9JLR1 Scn4a-201ENSMUST00000021056 6598 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Sec61a2Q9JLR1 Nckap5-208ENSMUST00000161954 7090 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Sec61a2Q9JLR1 AC165148.1-201ENSMUST00000224795 2372 ntBASIC9.28□□□□□ -0.92
Sec61a2Q9JLR1 Slc6a12-201ENSMUST00000032200 2644 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Sec61a2Q9JLR1 Ufsp2-201ENSMUST00000034051 1640 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Sec61a2Q9JLR1 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Sec61a2Q9JLR1 Loxl3-202ENSMUST00000101257 3252 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Sec61a2Q9JLR1 Tsix-202ENSMUST00000211291 3263 ntTSL 5 BASIC9.28□□□□□ -0.92
Sec61a2Q9JLR1 Ctsl-205ENSMUST00000222517 6168 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Sec61a2Q9JLR1 Gm19557-201ENSMUST00000182109 2765 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Sec61a2Q9JLR1 Aebp1-202ENSMUST00000109829 2541 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Sec61a2Q9JLR1 Acss3-203ENSMUST00000165067 4696 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Sec61a2Q9JLR1 Zfp605-202ENSMUST00000112528 3158 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms