Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Gm10238-201ENSMUST00000089689 408 ntBASIC10.81□□□□□ -0.68
Chmp2aQ9DB34 Pms1-201ENSMUST00000027267 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chmp2aQ9DB34 D630003M21Rik-203ENSMUST00000169335 3457 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Chmp2aQ9DB34 Trim34a-201ENSMUST00000060315 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chmp2aQ9DB34 Lrrn4cl-201ENSMUST00000096257 2583 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chmp2aQ9DB34 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Chmp2aQ9DB34 Gm6783-201ENSMUST00000120916 1437 ntBASIC10.81□□□□□ -0.68
Chmp2aQ9DB34 Lpin1-201ENSMUST00000067124 5581 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chmp2aQ9DB34 Gmip-201ENSMUST00000036074 3933 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chmp2aQ9DB34 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Chmp2aQ9DB34 Vbp1-201ENSMUST00000033540 1595 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chmp2aQ9DB34 Gm10548-201ENSMUST00000097631 2629 ntBASIC10.81□□□□□ -0.68
Chmp2aQ9DB34 4933408B17Rik-201ENSMUST00000056932 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chmp2aQ9DB34 Olfr130-202ENSMUST00000215726 5810 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Chmp2aQ9DB34 AC122367.1-201ENSMUST00000221978 1709 ntBASIC10.81□□□□□ -0.68
Chmp2aQ9DB34 Cngb1-204ENSMUST00000121162 3336 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Chmp2aQ9DB34 Cdkn1b-202ENSMUST00000067327 4552 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Chmp2aQ9DB34 Arid5a-202ENSMUST00000115029 4329 ntTSL 3 BASIC10.8□□□□□ -0.68
Chmp2aQ9DB34 Nudcd3-201ENSMUST00000066496 3927 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Chmp2aQ9DB34 Cep70-207ENSMUST00000190715 1768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Chmp2aQ9DB34 Stxbp5l-206ENSMUST00000114787 4394 ntAPPRIS P3 TSL 5 BASIC10.8□□□□□ -0.68
Chmp2aQ9DB34 Adamts4-203ENSMUST00000219033 4386 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Chmp2aQ9DB34 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC10.8□□□□□ -0.68
Chmp2aQ9DB34 Gm12716-201ENSMUST00000120606 1354 ntBASIC10.8□□□□□ -0.68
Chmp2aQ9DB34 Gm42970-201ENSMUST00000196407 1352 ntBASIC10.8□□□□□ -0.68
Chmp2aQ9DB34 Htr1a-201ENSMUST00000022235 4484 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Chmp2aQ9DB34 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Chmp2aQ9DB34 Tmem67-202ENSMUST00000108293 3945 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Chmp2aQ9DB34 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Chmp2aQ9DB34 Csde1-207ENSMUST00000197827 2671 ntAPPRIS P3 TSL 5 BASIC10.8□□□□□ -0.68
Chmp2aQ9DB34 Igkv3-9-201ENSMUST00000103398 359 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Chmp2aQ9DB34 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Chmp2aQ9DB34 Cryzl1-202ENSMUST00000114023 1154 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Chmp2aQ9DB34 Mir1249-201ENSMUST00000116791 98 ntBASIC10.8□□□□□ -0.68
Chmp2aQ9DB34 Gm11701-201ENSMUST00000121277 1142 ntBASIC10.8□□□□□ -0.68
Chmp2aQ9DB34 Gm14052-201ENSMUST00000121434 1031 ntBASIC10.8□□□□□ -0.68
Chmp2aQ9DB34 Cryzl1-206ENSMUST00000124282 1187 ntTSL 5 BASIC10.8□□□□□ -0.68
Chmp2aQ9DB34 Gm14320-201ENSMUST00000137275 1023 ntTSL 3 BASIC10.8□□□□□ -0.68
Chmp2aQ9DB34 Ubl5-203ENSMUST00000160124 501 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Chmp2aQ9DB34 Gm27956-201ENSMUST00000175604 260 ntBASIC10.8□□□□□ -0.68
Chmp2aQ9DB34 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Chmp2aQ9DB34 Tex35-206ENSMUST00000187546 856 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Chmp2aQ9DB34 Gm29346-201ENSMUST00000188147 255 ntTSL 3 BASIC10.8□□□□□ -0.68
Chmp2aQ9DB34 Gm29157-201ENSMUST00000188753 612 ntBASIC10.8□□□□□ -0.68
Chmp2aQ9DB34 Gm37885-202ENSMUST00000195868 685 ntTSL 3 BASIC10.8□□□□□ -0.68
Chmp2aQ9DB34 Gm42493-201ENSMUST00000197559 1121 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Chmp2aQ9DB34 Gm42617-201ENSMUST00000197640 1229 ntBASIC10.8□□□□□ -0.68
Chmp2aQ9DB34 Wbp1-209ENSMUST00000205023 716 ntBASIC10.8□□□□□ -0.68
Chmp2aQ9DB34 BC106175-202ENSMUST00000219344 1213 ntBASIC10.8□□□□□ -0.68
Chmp2aQ9DB34 AC161052.1-201ENSMUST00000222856 910 ntTSL 5 BASIC10.8□□□□□ -0.68
Chmp2aQ9DB34 Tceal9-201ENSMUST00000048687 1019 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Chmp2aQ9DB34 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Chmp2aQ9DB34 n-R5s71-201ENSMUST00000093668 119 ntBASIC10.8□□□□□ -0.68
Chmp2aQ9DB34 Mrps14-202ENSMUST00000097193 787 ntTSL 2 BASIC10.8□□□□□ -0.68
Chmp2aQ9DB34 Olfr1219-201ENSMUST00000099797 936 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Chmp2aQ9DB34 Gm16576-201ENSMUST00000128342 5404 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Chmp2aQ9DB34 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Chmp2aQ9DB34 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Chmp2aQ9DB34 Echdc1-201ENSMUST00000020034 3856 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Chmp2aQ9DB34 Limch1-202ENSMUST00000101164 5192 ntAPPRIS P2 TSL 5 BASIC10.8□□□□□ -0.68
Chmp2aQ9DB34 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Chmp2aQ9DB34 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Chmp2aQ9DB34 Cenpj-203ENSMUST00000225951 4756 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Chmp2aQ9DB34 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Chmp2aQ9DB34 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC10.8□□□□□ -0.68
Chmp2aQ9DB34 Pcdhga5-201ENSMUST00000193414 4664 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Chmp2aQ9DB34 Nemp2-201ENSMUST00000165859 3396 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Chmp2aQ9DB34 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Chmp2aQ9DB34 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Chmp2aQ9DB34 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Chmp2aQ9DB34 Ptpn2-202ENSMUST00000120934 1497 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Chmp2aQ9DB34 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Chmp2aQ9DB34 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC10.8□□□□□ -0.68
Chmp2aQ9DB34 Zfp74-204ENSMUST00000108212 2060 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Chmp2aQ9DB34 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Chmp2aQ9DB34 Med24-202ENSMUST00000100500 3133 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Chmp2aQ9DB34 Gm43372-201ENSMUST00000202662 3016 ntBASIC10.79□□□□□ -0.68
Chmp2aQ9DB34 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Chmp2aQ9DB34 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC10.79□□□□□ -0.68
Chmp2aQ9DB34 Ppip5k1-204ENSMUST00000110627 5494 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Chmp2aQ9DB34 Slc10a1-201ENSMUST00000095572 1674 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Chmp2aQ9DB34 9330175E14Rik-201ENSMUST00000180445 4852 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Chmp2aQ9DB34 Gm43625-201ENSMUST00000199177 1539 ntBASIC10.79□□□□□ -0.68
Chmp2aQ9DB34 Phc1-215ENSMUST00000161739 3893 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Chmp2aQ9DB34 Cyp2g1-201ENSMUST00000040944 1896 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Chmp2aQ9DB34 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Chmp2aQ9DB34 Gm8016-201ENSMUST00000221830 1575 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Chmp2aQ9DB34 Gm10643-201ENSMUST00000098592 1577 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Chmp2aQ9DB34 Lrrc23-202ENSMUST00000112475 1444 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Chmp2aQ9DB34 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Chmp2aQ9DB34 Apba2-206ENSMUST00000206246 3027 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Chmp2aQ9DB34 Gm37048-201ENSMUST00000194827 5578 ntBASIC10.79□□□□□ -0.68
Chmp2aQ9DB34 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Chmp2aQ9DB34 Rab29-202ENSMUST00000112386 1202 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Chmp2aQ9DB34 Gm6441-201ENSMUST00000120983 696 ntBASIC10.79□□□□□ -0.68
Chmp2aQ9DB34 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC10.79□□□□□ -0.68
Chmp2aQ9DB34 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Chmp2aQ9DB34 Trav18-202ENSMUST00000186573 325 ntAPPRIS ALT2 BASIC10.79□□□□□ -0.68
Chmp2aQ9DB34 Gm8022-201ENSMUST00000191763 904 ntBASIC10.79□□□□□ -0.68
Chmp2aQ9DB34 Gm6606-201ENSMUST00000193613 947 ntBASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 115.8 ms