Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Polr1e-201ENSMUST00000029999 1724 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh15Q99PJ1 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Pcdh15Q99PJ1 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC11.45□□□□□ -0.58
Pcdh15Q99PJ1 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh15Q99PJ1 Gm16077-201ENSMUST00000121915 655 ntBASIC11.45□□□□□ -0.58
Pcdh15Q99PJ1 A530010F05Rik-201ENSMUST00000146845 1020 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh15Q99PJ1 Ear6-202ENSMUST00000169070 893 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Pcdh15Q99PJ1 Kank3-204ENSMUST00000173789 783 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh15Q99PJ1 Ciao1-205ENSMUST00000174863 531 ntTSL 5 BASIC11.45□□□□□ -0.58
Pcdh15Q99PJ1 Gstp3-202ENSMUST00000189808 708 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh15Q99PJ1 Gm29471-201ENSMUST00000190527 700 ntBASIC11.45□□□□□ -0.58
Pcdh15Q99PJ1 Olfr1511-201ENSMUST00000078171 957 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Pcdh15Q99PJ1 Gm23037-201ENSMUST00000083874 324 ntBASIC11.45□□□□□ -0.58
Pcdh15Q99PJ1 Gm5499-201ENSMUST00000090731 885 ntBASIC11.45□□□□□ -0.58
Pcdh15Q99PJ1 Celf2-211ENSMUST00000142941 2338 ntTSL 5 BASIC11.45□□□□□ -0.58
Pcdh15Q99PJ1 Celf2-213ENSMUST00000150624 2332 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh15Q99PJ1 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh15Q99PJ1 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh15Q99PJ1 Sertad4-201ENSMUST00000016406 3090 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
Pcdh15Q99PJ1 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh15Q99PJ1 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Pcdh15Q99PJ1 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Pcdh15Q99PJ1 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh15Q99PJ1 Morf4l2-201ENSMUST00000033797 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh15Q99PJ1 Cd200r2-201ENSMUST00000102805 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh15Q99PJ1 Gm46992-201ENSMUST00000222120 1389 ntBASIC11.44□□□□□ -0.58
Pcdh15Q99PJ1 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh15Q99PJ1 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh15Q99PJ1 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh15Q99PJ1 Ccnb1ip1-201ENSMUST00000095932 1509 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Pcdh15Q99PJ1 Mfsd2b-201ENSMUST00000045921 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh15Q99PJ1 Gckr-202ENSMUST00000201166 2272 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Pcdh15Q99PJ1 Acsm2-201ENSMUST00000084647 2051 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh15Q99PJ1 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh15Q99PJ1 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh15Q99PJ1 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh15Q99PJ1 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh15Q99PJ1 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh15Q99PJ1 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Pcdh15Q99PJ1 Apol7a-204ENSMUST00000176074 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh15Q99PJ1 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh15Q99PJ1 Nt5c1b-211ENSMUST00000218339 1843 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Pcdh15Q99PJ1 Nt5c1b-201ENSMUST00000002456 1849 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh15Q99PJ1 Gm11514-201ENSMUST00000117670 432 ntBASIC11.44□□□□□ -0.58
Pcdh15Q99PJ1 Gm23985-201ENSMUST00000157140 124 ntBASIC11.44□□□□□ -0.58
Pcdh15Q99PJ1 n-R5s210-201ENSMUST00000177688 119 ntBASIC11.44□□□□□ -0.58
Pcdh15Q99PJ1 Gm9621-201ENSMUST00000183322 1003 ntBASIC11.44□□□□□ -0.58
Pcdh15Q99PJ1 Gm34106-201ENSMUST00000193782 503 ntTSL 3 BASIC11.44□□□□□ -0.58
Pcdh15Q99PJ1 Gm42495-201ENSMUST00000200324 405 ntTSL 3 BASIC11.44□□□□□ -0.58
Pcdh15Q99PJ1 Gm5130-201ENSMUST00000210233 959 ntBASIC11.44□□□□□ -0.58
Pcdh15Q99PJ1 Gm31763-201ENSMUST00000217788 673 ntTSL 3 BASIC11.44□□□□□ -0.58
Pcdh15Q99PJ1 Vmn1r192-201ENSMUST00000072632 1067 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Pcdh15Q99PJ1 Tatdn3-202ENSMUST00000085633 1089 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh15Q99PJ1 Lep-201ENSMUST00000069789 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh15Q99PJ1 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh15Q99PJ1 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh15Q99PJ1 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh15Q99PJ1 Isx-201ENSMUST00000034034 1793 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh15Q99PJ1 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh15Q99PJ1 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC11.44□□□□□ -0.58
Pcdh15Q99PJ1 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh15Q99PJ1 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdh15Q99PJ1 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.43□□□□□ -0.58
Pcdh15Q99PJ1 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh15Q99PJ1 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Pcdh15Q99PJ1 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh15Q99PJ1 Pfn4-201ENSMUST00000020967 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh15Q99PJ1 Gprc5d-201ENSMUST00000032327 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh15Q99PJ1 D630003M21Rik-203ENSMUST00000169335 3457 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Pcdh15Q99PJ1 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.43□□□□□ -0.58
Pcdh15Q99PJ1 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh15Q99PJ1 Pax6-206ENSMUST00000111086 2601 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh15Q99PJ1 Pcdhb20-201ENSMUST00000052179 3559 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Pcdh15Q99PJ1 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC11.43□□□□□ -0.58
Pcdh15Q99PJ1 Mospd1-201ENSMUST00000023836 1763 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh15Q99PJ1 Mospd1-202ENSMUST00000096447 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh15Q99PJ1 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh15Q99PJ1 Gm4405-201ENSMUST00000106038 982 ntBASIC11.43□□□□□ -0.58
Pcdh15Q99PJ1 Gngt2-206ENSMUST00000107712 498 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Pcdh15Q99PJ1 Rhox4c-201ENSMUST00000115183 903 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh15Q99PJ1 Snhg7os-201ENSMUST00000126798 546 ntTSL 5 BASIC11.43□□□□□ -0.58
Pcdh15Q99PJ1 4933431E20Rik-205ENSMUST00000137970 795 ntTSL 3 BASIC11.43□□□□□ -0.58
Pcdh15Q99PJ1 Slc35a4-205ENSMUST00000185899 312 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh15Q99PJ1 Nanog-ps1-201ENSMUST00000188967 250 ntBASIC11.43□□□□□ -0.58
Pcdh15Q99PJ1 Gm38258-201ENSMUST00000191792 675 ntTSL 3 BASIC11.43□□□□□ -0.58
Pcdh15Q99PJ1 Gm44778-201ENSMUST00000206447 668 ntTSL 3 BASIC11.43□□□□□ -0.58
Pcdh15Q99PJ1 Gm32111-201ENSMUST00000207689 846 ntBASIC11.43□□□□□ -0.58
Pcdh15Q99PJ1 AC159106.2-201ENSMUST00000223732 486 ntBASIC11.43□□□□□ -0.58
Pcdh15Q99PJ1 AC133156.2-201ENSMUST00000226865 784 ntBASIC11.43□□□□□ -0.58
Pcdh15Q99PJ1 AC123735.1-201ENSMUST00000227358 605 ntBASIC11.43□□□□□ -0.58
Pcdh15Q99PJ1 Plac8l1-201ENSMUST00000081374 763 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh15Q99PJ1 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh15Q99PJ1 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh15Q99PJ1 Gm36940-201ENSMUST00000194281 2036 ntBASIC11.43□□□□□ -0.58
Pcdh15Q99PJ1 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh15Q99PJ1 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh15Q99PJ1 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh15Q99PJ1 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdh15Q99PJ1 Gm18345-201ENSMUST00000200710 1390 ntBASIC11.43□□□□□ -0.58
Pcdh15Q99PJ1 9630002D21Rik-201ENSMUST00000221128 1351 ntTSL 5 BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms