Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Mid1-201ENSMUST00000036753 3753 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Cd28P31041 Bcl11a-203ENSMUST00000109516 2329 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Cd28P31041 Shc4-201ENSMUST00000042246 4059 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cd28P31041 Oacyl-202ENSMUST00000117694 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cd28P31041 Rnf38-201ENSMUST00000045793 5012 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cd28P31041 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cd28P31041 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cd28P31041 Ccdc32-203ENSMUST00000110834 828 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Cd28P31041 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Cd28P31041 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC9.02□□□□□ -0.97
Cd28P31041 Gm24346-201ENSMUST00000158712 194 ntBASIC9.02□□□□□ -0.97
Cd28P31041 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Cd28P31041 Gm6485-201ENSMUST00000160676 439 ntBASIC9.02□□□□□ -0.97
Cd28P31041 Gm25732-201ENSMUST00000175168 60 ntBASIC9.02□□□□□ -0.97
Cd28P31041 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC9.02□□□□□ -0.97
Cd28P31041 Gm5543-201ENSMUST00000193329 1091 ntBASIC9.02□□□□□ -0.97
Cd28P31041 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC9.02□□□□□ -0.97
Cd28P31041 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC9.02□□□□□ -0.97
Cd28P31041 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC9.02□□□□□ -0.97
Cd28P31041 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC9.02□□□□□ -0.97
Cd28P31041 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cd28P31041 Gm8170-201ENSMUST00000218581 945 ntBASIC9.02□□□□□ -0.97
Cd28P31041 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC9.02□□□□□ -0.97
Cd28P31041 Gm9102-201ENSMUST00000219250 465 ntBASIC9.02□□□□□ -0.97
Cd28P31041 Gm9176-201ENSMUST00000219955 1120 ntBASIC9.02□□□□□ -0.97
Cd28P31041 Atp6v1e2-201ENSMUST00000065758 1005 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cd28P31041 Gpatch2l-201ENSMUST00000071106 3829 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cd28P31041 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cd28P31041 Cdc25b-202ENSMUST00000079857 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cd28P31041 Olfr366-202ENSMUST00000214897 5333 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Cd28P31041 Col6a5-201ENSMUST00000165165 8046 ntTSL 5 BASIC9.02□□□□□ -0.97
Cd28P31041 AC123534.1-202ENSMUST00000224256 1837 ntBASIC9.02□□□□□ -0.97
Cd28P31041 Ints10-204ENSMUST00000110242 4250 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Cd28P31041 Ano4-202ENSMUST00000181976 1410 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Cd28P31041 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Cd28P31041 Sf3b2-201ENSMUST00000025774 3231 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cd28P31041 Cdc6-201ENSMUST00000092706 4614 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cd28P31041 Gm12592-201ENSMUST00000155332 2954 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Cd28P31041 Itgb6-201ENSMUST00000028348 2995 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cd28P31041 Gm19611-201ENSMUST00000216401 1865 ntBASIC9.02□□□□□ -0.97
Cd28P31041 Clip1-201ENSMUST00000031382 4387 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
Cd28P31041 Slc17a2-202ENSMUST00000099697 1893 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
Cd28P31041 Ctnnd1-217ENSMUST00000111691 5380 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Cd28P31041 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Cd28P31041 Olfr71-203ENSMUST00000217544 2707 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Cd28P31041 CT009601.1-201ENSMUST00000225567 2705 ntBASIC9.02□□□□□ -0.97
Cd28P31041 Myo1a-201ENSMUST00000079590 3439 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cd28P31041 Zmat3-203ENSMUST00000168566 7672 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cd28P31041 Phf8-206ENSMUST00000112670 3484 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cd28P31041 Wdr78-202ENSMUST00000036557 3479 ntTSL 5 BASIC9.01□□□□□ -0.97
Cd28P31041 Sv2b-201ENSMUST00000085164 5307 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cd28P31041 Zfp709-203ENSMUST00000188685 7186 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cd28P31041 Myadm-202ENSMUST00000164553 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cd28P31041 Rel-201ENSMUST00000102864 7466 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cd28P31041 Pantr1-208ENSMUST00000181660 2085 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Cd28P31041 Gm45139-201ENSMUST00000206543 2057 ntBASIC9.01□□□□□ -0.97
Cd28P31041 Kif23-201ENSMUST00000034815 3398 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cd28P31041 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC9.01□□□□□ -0.97
Cd28P31041 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Cd28P31041 AC110091.2-201ENSMUST00000215107 1512 ntTSL 5 BASIC9.01□□□□□ -0.97
Cd28P31041 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Cd28P31041 Prpf40a-201ENSMUST00000076313 7374 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cd28P31041 Phf21a-208ENSMUST00000111294 3710 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Cd28P31041 Pcdhb4-201ENSMUST00000056712 3718 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Cd28P31041 Gm40289-201ENSMUST00000201470 2268 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Cd28P31041 Zfhx2-201ENSMUST00000036328 10397 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cd28P31041 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cd28P31041 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC9.01□□□□□ -0.97
Cd28P31041 Gm5403-201ENSMUST00000117105 2795 ntBASIC9.01□□□□□ -0.97
Cd28P31041 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cd28P31041 Gm14006-201ENSMUST00000122132 981 ntBASIC9.01□□□□□ -0.97
Cd28P31041 1700001J04Rik-202ENSMUST00000154037 743 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Cd28P31041 Acox2-204ENSMUST00000164598 2907 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cd28P31041 Gm29135-201ENSMUST00000188411 612 ntTSL 5 BASIC9.01□□□□□ -0.97
Cd28P31041 Gm28988-201ENSMUST00000191363 1897 ntTSL 5 BASIC9.01□□□□□ -0.97
Cd28P31041 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC9.01□□□□□ -0.97
Cd28P31041 Gm4430-202ENSMUST00000193902 1041 ntBASIC9.01□□□□□ -0.97
Cd28P31041 Gm8625-201ENSMUST00000194185 1077 ntBASIC9.01□□□□□ -0.97
Cd28P31041 Gm6069-201ENSMUST00000196501 463 ntBASIC9.01□□□□□ -0.97
Cd28P31041 Gm9645-201ENSMUST00000197131 792 ntBASIC9.01□□□□□ -0.97
Cd28P31041 Gm42608-201ENSMUST00000197563 2018 ntBASIC9.01□□□□□ -0.97
Cd28P31041 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC9.01□□□□□ -0.97
Cd28P31041 AC114645.1-201ENSMUST00000215831 187 ntBASIC9.01□□□□□ -0.97
Cd28P31041 Akap6-202ENSMUST00000219786 4564 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cd28P31041 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Cd28P31041 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC9.01□□□□□ -0.97
Cd28P31041 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC9.01□□□□□ -0.97
Cd28P31041 AC154305.2-201ENSMUST00000225813 901 ntBASIC9.01□□□□□ -0.97
Cd28P31041 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cd28P31041 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cd28P31041 Mc3r-201ENSMUST00000038532 2623 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Cd28P31041 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Cd28P31041 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Cd28P31041 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Cd28P31041 Egf-201ENSMUST00000029653 4761 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cd28P31041 Vps39-201ENSMUST00000028752 4339 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cd28P31041 Smcr8-201ENSMUST00000056907 7391 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cd28P31041 Scml2-202ENSMUST00000074802 3440 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Cd28P31041 Tns1-201ENSMUST00000169786 9966 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Cd28P31041 Slc9b2-201ENSMUST00000051849 4818 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms