Protein–RNA interactions for Protein: Q9Z2Q5

Mrpl40, 39S ribosomal protein L40, mitochondrial, mousemouse

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl40Q9Z2Q5 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.69■□□□□ 0.74
Mrpl40Q9Z2Q5 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Mrpl40Q9Z2Q5 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
Mrpl40Q9Z2Q5 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Mrpl40Q9Z2Q5 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Mrpl40Q9Z2Q5 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Mrpl40Q9Z2Q5 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Mrpl40Q9Z2Q5 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.68■□□□□ 0.74
Mrpl40Q9Z2Q5 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Mrpl40Q9Z2Q5 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Mrpl40Q9Z2Q5 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
Mrpl40Q9Z2Q5 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.68■□□□□ 0.74
Mrpl40Q9Z2Q5 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Mrpl40Q9Z2Q5 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Mrpl40Q9Z2Q5 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Mrpl40Q9Z2Q5 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Mrpl40Q9Z2Q5 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Mrpl40Q9Z2Q5 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Mrpl40Q9Z2Q5 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.67■□□□□ 0.74
Mrpl40Q9Z2Q5 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mrpl40Q9Z2Q5 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mrpl40Q9Z2Q5 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Mrpl40Q9Z2Q5 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.67■□□□□ 0.74
Mrpl40Q9Z2Q5 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
Mrpl40Q9Z2Q5 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.67■□□□□ 0.74
Mrpl40Q9Z2Q5 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Mrpl40Q9Z2Q5 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mrpl40Q9Z2Q5 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.66■□□□□ 0.74
Mrpl40Q9Z2Q5 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Mrpl40Q9Z2Q5 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Mrpl40Q9Z2Q5 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.66■□□□□ 0.74
Mrpl40Q9Z2Q5 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Mrpl40Q9Z2Q5 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Mrpl40Q9Z2Q5 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Mrpl40Q9Z2Q5 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Mrpl40Q9Z2Q5 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Mrpl40Q9Z2Q5 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
Mrpl40Q9Z2Q5 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Mrpl40Q9Z2Q5 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Mrpl40Q9Z2Q5 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Mrpl40Q9Z2Q5 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Mrpl40Q9Z2Q5 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Mrpl40Q9Z2Q5 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Mrpl40Q9Z2Q5 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Mrpl40Q9Z2Q5 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Mrpl40Q9Z2Q5 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Mrpl40Q9Z2Q5 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Mrpl40Q9Z2Q5 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
Mrpl40Q9Z2Q5 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Mrpl40Q9Z2Q5 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.65■□□□□ 0.74
Mrpl40Q9Z2Q5 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Mrpl40Q9Z2Q5 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Mrpl40Q9Z2Q5 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Mrpl40Q9Z2Q5 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Mrpl40Q9Z2Q5 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Mrpl40Q9Z2Q5 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Mrpl40Q9Z2Q5 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Mrpl40Q9Z2Q5 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Mrpl40Q9Z2Q5 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Mrpl40Q9Z2Q5 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Mrpl40Q9Z2Q5 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.64■□□□□ 0.73
Mrpl40Q9Z2Q5 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.64■□□□□ 0.73
Mrpl40Q9Z2Q5 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Mrpl40Q9Z2Q5 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.64■□□□□ 0.73
Mrpl40Q9Z2Q5 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.64■□□□□ 0.73
Mrpl40Q9Z2Q5 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Mrpl40Q9Z2Q5 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Mrpl40Q9Z2Q5 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Mrpl40Q9Z2Q5 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Mrpl40Q9Z2Q5 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Mrpl40Q9Z2Q5 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Mrpl40Q9Z2Q5 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.63■□□□□ 0.73
Mrpl40Q9Z2Q5 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Mrpl40Q9Z2Q5 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Mrpl40Q9Z2Q5 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Mrpl40Q9Z2Q5 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Mrpl40Q9Z2Q5 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Mrpl40Q9Z2Q5 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Mrpl40Q9Z2Q5 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Mrpl40Q9Z2Q5 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Mrpl40Q9Z2Q5 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Mrpl40Q9Z2Q5 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Mrpl40Q9Z2Q5 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Mrpl40Q9Z2Q5 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Mrpl40Q9Z2Q5 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Mrpl40Q9Z2Q5 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Mrpl40Q9Z2Q5 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Mrpl40Q9Z2Q5 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Mrpl40Q9Z2Q5 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Mrpl40Q9Z2Q5 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Mrpl40Q9Z2Q5 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Mrpl40Q9Z2Q5 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Mrpl40Q9Z2Q5 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Mrpl40Q9Z2Q5 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Mrpl40Q9Z2Q5 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Mrpl40Q9Z2Q5 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Mrpl40Q9Z2Q5 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
Mrpl40Q9Z2Q5 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Mrpl40Q9Z2Q5 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Mrpl40Q9Z2Q5 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms