Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cx3cr1Q9Z0D9 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cx3cr1Q9Z0D9 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Cx3cr1Q9Z0D9 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cx3cr1Q9Z0D9 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cx3cr1Q9Z0D9 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC16.77■□□□□ 0.27
Cx3cr1Q9Z0D9 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cx3cr1Q9Z0D9 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cx3cr1Q9Z0D9 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cx3cr1Q9Z0D9 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Cx3cr1Q9Z0D9 Gm10620-201ENSMUST00000098379 1332 ntBASIC16.76■□□□□ 0.27
Cx3cr1Q9Z0D9 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cx3cr1Q9Z0D9 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cx3cr1Q9Z0D9 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cx3cr1Q9Z0D9 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cx3cr1Q9Z0D9 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC16.76■□□□□ 0.27
Cx3cr1Q9Z0D9 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cx3cr1Q9Z0D9 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cx3cr1Q9Z0D9 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cx3cr1Q9Z0D9 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cx3cr1Q9Z0D9 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cx3cr1Q9Z0D9 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cx3cr1Q9Z0D9 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Cx3cr1Q9Z0D9 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cx3cr1Q9Z0D9 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cx3cr1Q9Z0D9 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cx3cr1Q9Z0D9 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cx3cr1Q9Z0D9 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cx3cr1Q9Z0D9 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cx3cr1Q9Z0D9 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cx3cr1Q9Z0D9 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cx3cr1Q9Z0D9 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cx3cr1Q9Z0D9 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.75■□□□□ 0.27
Cx3cr1Q9Z0D9 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cx3cr1Q9Z0D9 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cx3cr1Q9Z0D9 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cx3cr1Q9Z0D9 Gm11175-201ENSMUST00000116172 543 ntBASIC16.74■□□□□ 0.27
Cx3cr1Q9Z0D9 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC16.74■□□□□ 0.27
Cx3cr1Q9Z0D9 Gm12366-201ENSMUST00000121722 873 ntBASIC16.74■□□□□ 0.27
Cx3cr1Q9Z0D9 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC16.74■□□□□ 0.27
Cx3cr1Q9Z0D9 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cx3cr1Q9Z0D9 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cx3cr1Q9Z0D9 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC16.74■□□□□ 0.27
Cx3cr1Q9Z0D9 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC16.74■□□□□ 0.27
Cx3cr1Q9Z0D9 Gm5786-201ENSMUST00000085368 882 ntBASIC16.74■□□□□ 0.27
Cx3cr1Q9Z0D9 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
Cx3cr1Q9Z0D9 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cx3cr1Q9Z0D9 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cx3cr1Q9Z0D9 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cx3cr1Q9Z0D9 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cx3cr1Q9Z0D9 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cx3cr1Q9Z0D9 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.73■□□□□ 0.27
Cx3cr1Q9Z0D9 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cx3cr1Q9Z0D9 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cx3cr1Q9Z0D9 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
Cx3cr1Q9Z0D9 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cx3cr1Q9Z0D9 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cx3cr1Q9Z0D9 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cx3cr1Q9Z0D9 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Cx3cr1Q9Z0D9 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cx3cr1Q9Z0D9 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cx3cr1Q9Z0D9 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cx3cr1Q9Z0D9 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cx3cr1Q9Z0D9 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Cx3cr1Q9Z0D9 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cx3cr1Q9Z0D9 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cx3cr1Q9Z0D9 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cx3cr1Q9Z0D9 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC16.72■□□□□ 0.27
Cx3cr1Q9Z0D9 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Cx3cr1Q9Z0D9 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Cx3cr1Q9Z0D9 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cx3cr1Q9Z0D9 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cx3cr1Q9Z0D9 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cx3cr1Q9Z0D9 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cx3cr1Q9Z0D9 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cx3cr1Q9Z0D9 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cx3cr1Q9Z0D9 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cx3cr1Q9Z0D9 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cx3cr1Q9Z0D9 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cx3cr1Q9Z0D9 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cx3cr1Q9Z0D9 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cx3cr1Q9Z0D9 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cx3cr1Q9Z0D9 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cx3cr1Q9Z0D9 Gm6802-201ENSMUST00000167843 1983 ntBASIC16.71■□□□□ 0.27
Cx3cr1Q9Z0D9 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.71■□□□□ 0.26
Cx3cr1Q9Z0D9 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cx3cr1Q9Z0D9 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC16.7■□□□□ 0.26
Cx3cr1Q9Z0D9 Gm16464-201ENSMUST00000117815 1095 ntBASIC16.7■□□□□ 0.26
Cx3cr1Q9Z0D9 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cx3cr1Q9Z0D9 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cx3cr1Q9Z0D9 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cx3cr1Q9Z0D9 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cx3cr1Q9Z0D9 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cx3cr1Q9Z0D9 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cx3cr1Q9Z0D9 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cx3cr1Q9Z0D9 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cx3cr1Q9Z0D9 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Cx3cr1Q9Z0D9 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cx3cr1Q9Z0D9 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cx3cr1Q9Z0D9 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms