Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Col13a1Q9R1N9 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col13a1Q9R1N9 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Col13a1Q9R1N9 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC16.8■□□□□ 0.28
Col13a1Q9R1N9 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col13a1Q9R1N9 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Col13a1Q9R1N9 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col13a1Q9R1N9 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Col13a1Q9R1N9 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col13a1Q9R1N9 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.8■□□□□ 0.28
Col13a1Q9R1N9 Gm43530-201ENSMUST00000195920 274 ntBASIC16.8■□□□□ 0.28
Col13a1Q9R1N9 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Col13a1Q9R1N9 Gm9988-201ENSMUST00000069786 435 ntBASIC16.8■□□□□ 0.28
Col13a1Q9R1N9 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Col13a1Q9R1N9 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col13a1Q9R1N9 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Col13a1Q9R1N9 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col13a1Q9R1N9 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col13a1Q9R1N9 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col13a1Q9R1N9 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col13a1Q9R1N9 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Col13a1Q9R1N9 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Col13a1Q9R1N9 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Col13a1Q9R1N9 Gm42418-201ENSMUST00000182010 1831 ntBASIC16.79■□□□□ 0.28
Col13a1Q9R1N9 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col13a1Q9R1N9 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col13a1Q9R1N9 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col13a1Q9R1N9 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC16.79■□□□□ 0.28
Col13a1Q9R1N9 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC16.79■□□□□ 0.28
Col13a1Q9R1N9 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col13a1Q9R1N9 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col13a1Q9R1N9 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Col13a1Q9R1N9 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col13a1Q9R1N9 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col13a1Q9R1N9 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col13a1Q9R1N9 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col13a1Q9R1N9 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col13a1Q9R1N9 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC16.78■□□□□ 0.28
Col13a1Q9R1N9 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col13a1Q9R1N9 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col13a1Q9R1N9 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col13a1Q9R1N9 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col13a1Q9R1N9 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col13a1Q9R1N9 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col13a1Q9R1N9 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Col13a1Q9R1N9 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col13a1Q9R1N9 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col13a1Q9R1N9 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Col13a1Q9R1N9 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col13a1Q9R1N9 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col13a1Q9R1N9 Gm22240-201ENSMUST00000175225 82 ntBASIC16.77■□□□□ 0.28
Col13a1Q9R1N9 Mir7071-201ENSMUST00000184847 69 ntBASIC16.77■□□□□ 0.28
Col13a1Q9R1N9 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Col13a1Q9R1N9 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Col13a1Q9R1N9 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Col13a1Q9R1N9 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Col13a1Q9R1N9 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Col13a1Q9R1N9 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.76■□□□□ 0.27
Col13a1Q9R1N9 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
Col13a1Q9R1N9 Gm12441-201ENSMUST00000121806 588 ntBASIC16.76■□□□□ 0.27
Col13a1Q9R1N9 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col13a1Q9R1N9 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
Col13a1Q9R1N9 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col13a1Q9R1N9 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col13a1Q9R1N9 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Col13a1Q9R1N9 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Col13a1Q9R1N9 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col13a1Q9R1N9 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC16.75■□□□□ 0.27
Col13a1Q9R1N9 Gm38160-201ENSMUST00000193090 2499 ntBASIC16.75■□□□□ 0.27
Col13a1Q9R1N9 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col13a1Q9R1N9 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC16.75■□□□□ 0.27
Col13a1Q9R1N9 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Col13a1Q9R1N9 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col13a1Q9R1N9 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Col13a1Q9R1N9 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col13a1Q9R1N9 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col13a1Q9R1N9 Gm12504-201ENSMUST00000120860 2231 ntBASIC16.74■□□□□ 0.27
Col13a1Q9R1N9 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col13a1Q9R1N9 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col13a1Q9R1N9 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col13a1Q9R1N9 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col13a1Q9R1N9 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Col13a1Q9R1N9 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Col13a1Q9R1N9 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Col13a1Q9R1N9 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Col13a1Q9R1N9 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.74■□□□□ 0.27
Col13a1Q9R1N9 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col13a1Q9R1N9 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col13a1Q9R1N9 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Col13a1Q9R1N9 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC16.73■□□□□ 0.27
Col13a1Q9R1N9 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
Col13a1Q9R1N9 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Col13a1Q9R1N9 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC16.73■□□□□ 0.27
Col13a1Q9R1N9 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.73■□□□□ 0.27
Col13a1Q9R1N9 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC16.73■□□□□ 0.27
Col13a1Q9R1N9 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col13a1Q9R1N9 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Col13a1Q9R1N9 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col13a1Q9R1N9 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col13a1Q9R1N9 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms