Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rbfox1Q9JJ43 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rbfox1Q9JJ43 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC16.85■□□□□ 0.29
Rbfox1Q9JJ43 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rbfox1Q9JJ43 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rbfox1Q9JJ43 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rbfox1Q9JJ43 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rbfox1Q9JJ43 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rbfox1Q9JJ43 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rbfox1Q9JJ43 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rbfox1Q9JJ43 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rbfox1Q9JJ43 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rbfox1Q9JJ43 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rbfox1Q9JJ43 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rbfox1Q9JJ43 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rbfox1Q9JJ43 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rbfox1Q9JJ43 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rbfox1Q9JJ43 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rbfox1Q9JJ43 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rbfox1Q9JJ43 Gm9870-201ENSMUST00000063874 645 ntBASIC16.84■□□□□ 0.29
Rbfox1Q9JJ43 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC16.84■□□□□ 0.29
Rbfox1Q9JJ43 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rbfox1Q9JJ43 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rbfox1Q9JJ43 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rbfox1Q9JJ43 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Rbfox1Q9JJ43 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rbfox1Q9JJ43 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rbfox1Q9JJ43 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Rbfox1Q9JJ43 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rbfox1Q9JJ43 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Rbfox1Q9JJ43 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
Rbfox1Q9JJ43 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rbfox1Q9JJ43 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rbfox1Q9JJ43 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC16.83■□□□□ 0.28
Rbfox1Q9JJ43 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Rbfox1Q9JJ43 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rbfox1Q9JJ43 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rbfox1Q9JJ43 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rbfox1Q9JJ43 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rbfox1Q9JJ43 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC16.82■□□□□ 0.28
Rbfox1Q9JJ43 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rbfox1Q9JJ43 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Rbfox1Q9JJ43 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rbfox1Q9JJ43 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC16.82■□□□□ 0.28
Rbfox1Q9JJ43 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rbfox1Q9JJ43 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rbfox1Q9JJ43 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rbfox1Q9JJ43 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rbfox1Q9JJ43 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Rbfox1Q9JJ43 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rbfox1Q9JJ43 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rbfox1Q9JJ43 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rbfox1Q9JJ43 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rbfox1Q9JJ43 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC16.81■□□□□ 0.28
Rbfox1Q9JJ43 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC16.81■□□□□ 0.28
Rbfox1Q9JJ43 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rbfox1Q9JJ43 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rbfox1Q9JJ43 Gm6802-201ENSMUST00000167843 1983 ntBASIC16.8■□□□□ 0.28
Rbfox1Q9JJ43 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rbfox1Q9JJ43 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rbfox1Q9JJ43 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rbfox1Q9JJ43 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rbfox1Q9JJ43 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC16.8■□□□□ 0.28
Rbfox1Q9JJ43 Gm10657-201ENSMUST00000193528 1031 ntBASIC16.8■□□□□ 0.28
Rbfox1Q9JJ43 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC16.8■□□□□ 0.28
Rbfox1Q9JJ43 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rbfox1Q9JJ43 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rbfox1Q9JJ43 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rbfox1Q9JJ43 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rbfox1Q9JJ43 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rbfox1Q9JJ43 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Rbfox1Q9JJ43 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rbfox1Q9JJ43 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rbfox1Q9JJ43 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
Rbfox1Q9JJ43 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rbfox1Q9JJ43 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rbfox1Q9JJ43 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rbfox1Q9JJ43 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rbfox1Q9JJ43 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rbfox1Q9JJ43 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC16.79■□□□□ 0.28
Rbfox1Q9JJ43 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC16.79■□□□□ 0.28
Rbfox1Q9JJ43 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rbfox1Q9JJ43 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rbfox1Q9JJ43 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rbfox1Q9JJ43 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rbfox1Q9JJ43 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.78■□□□□ 0.28
Rbfox1Q9JJ43 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Rbfox1Q9JJ43 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rbfox1Q9JJ43 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rbfox1Q9JJ43 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rbfox1Q9JJ43 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC16.78■□□□□ 0.28
Rbfox1Q9JJ43 Gm42501-201ENSMUST00000200220 1026 ntBASIC16.78■□□□□ 0.28
Rbfox1Q9JJ43 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rbfox1Q9JJ43 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rbfox1Q9JJ43 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rbfox1Q9JJ43 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rbfox1Q9JJ43 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC16.77■□□□□ 0.28
Rbfox1Q9JJ43 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rbfox1Q9JJ43 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Rbfox1Q9JJ43 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms