Protein–RNA interactions for Protein: Q9DCF9

Ssr3, Translocon-associated protein subunit gamma, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr3Q9DCF9 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ssr3Q9DCF9 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ssr3Q9DCF9 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Ssr3Q9DCF9 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ssr3Q9DCF9 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ssr3Q9DCF9 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ssr3Q9DCF9 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ssr3Q9DCF9 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ssr3Q9DCF9 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.7■□□□□ 0.42
Ssr3Q9DCF9 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ssr3Q9DCF9 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ssr3Q9DCF9 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ssr3Q9DCF9 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ssr3Q9DCF9 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ssr3Q9DCF9 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ssr3Q9DCF9 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ssr3Q9DCF9 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ssr3Q9DCF9 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ssr3Q9DCF9 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ssr3Q9DCF9 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ssr3Q9DCF9 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ssr3Q9DCF9 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC17.69■□□□□ 0.42
Ssr3Q9DCF9 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ssr3Q9DCF9 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ssr3Q9DCF9 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ssr3Q9DCF9 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
Ssr3Q9DCF9 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ssr3Q9DCF9 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ssr3Q9DCF9 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC17.68■□□□□ 0.42
Ssr3Q9DCF9 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
Ssr3Q9DCF9 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ssr3Q9DCF9 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ssr3Q9DCF9 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ssr3Q9DCF9 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.68■□□□□ 0.42
Ssr3Q9DCF9 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC17.68■□□□□ 0.42
Ssr3Q9DCF9 Golph3-205ENSMUST00000228671 2842 ntBASIC17.68■□□□□ 0.42
Ssr3Q9DCF9 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ssr3Q9DCF9 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.67■□□□□ 0.42
Ssr3Q9DCF9 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC17.67■□□□□ 0.42
Ssr3Q9DCF9 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ssr3Q9DCF9 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ssr3Q9DCF9 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ssr3Q9DCF9 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ssr3Q9DCF9 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ssr3Q9DCF9 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ssr3Q9DCF9 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ssr3Q9DCF9 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ssr3Q9DCF9 Gm16437-201ENSMUST00000025669 507 ntBASIC17.67■□□□□ 0.42
Ssr3Q9DCF9 Gm9806-201ENSMUST00000051080 552 ntBASIC17.67■□□□□ 0.42
Ssr3Q9DCF9 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Ssr3Q9DCF9 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.67■□□□□ 0.42
Ssr3Q9DCF9 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Ssr3Q9DCF9 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ssr3Q9DCF9 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ssr3Q9DCF9 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ssr3Q9DCF9 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ssr3Q9DCF9 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ssr3Q9DCF9 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ssr3Q9DCF9 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ssr3Q9DCF9 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ssr3Q9DCF9 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ssr3Q9DCF9 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC17.66■□□□□ 0.42
Ssr3Q9DCF9 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ssr3Q9DCF9 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ssr3Q9DCF9 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ssr3Q9DCF9 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ssr3Q9DCF9 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ssr3Q9DCF9 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Ssr3Q9DCF9 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ssr3Q9DCF9 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ssr3Q9DCF9 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ssr3Q9DCF9 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Ssr3Q9DCF9 Scarna2-201ENSMUST00000157560 414 ntBASIC17.65■□□□□ 0.42
Ssr3Q9DCF9 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ssr3Q9DCF9 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ssr3Q9DCF9 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ssr3Q9DCF9 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ssr3Q9DCF9 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
Ssr3Q9DCF9 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ssr3Q9DCF9 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ssr3Q9DCF9 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ssr3Q9DCF9 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ssr3Q9DCF9 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ssr3Q9DCF9 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ssr3Q9DCF9 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ssr3Q9DCF9 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ssr3Q9DCF9 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ssr3Q9DCF9 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ssr3Q9DCF9 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Ssr3Q9DCF9 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ssr3Q9DCF9 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Ssr3Q9DCF9 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ssr3Q9DCF9 AC151971.4-201ENSMUST00000214717 704 ntBASIC17.63■□□□□ 0.41
Ssr3Q9DCF9 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ssr3Q9DCF9 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ssr3Q9DCF9 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.63■□□□□ 0.41
Ssr3Q9DCF9 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ssr3Q9DCF9 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ssr3Q9DCF9 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ssr3Q9DCF9 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms