Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.9■□□□□ 0.62
Shmt2Q9CZN7 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Shmt2Q9CZN7 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Shmt2Q9CZN7 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Shmt2Q9CZN7 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Shmt2Q9CZN7 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Shmt2Q9CZN7 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Shmt2Q9CZN7 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
Shmt2Q9CZN7 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Shmt2Q9CZN7 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Shmt2Q9CZN7 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Shmt2Q9CZN7 Gm7143-201ENSMUST00000222811 859 ntBASIC18.89■□□□□ 0.61
Shmt2Q9CZN7 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.89■□□□□ 0.61
Shmt2Q9CZN7 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Shmt2Q9CZN7 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Shmt2Q9CZN7 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Shmt2Q9CZN7 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.89■□□□□ 0.61
Shmt2Q9CZN7 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.89■□□□□ 0.61
Shmt2Q9CZN7 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
Shmt2Q9CZN7 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Shmt2Q9CZN7 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Shmt2Q9CZN7 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Shmt2Q9CZN7 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Shmt2Q9CZN7 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Shmt2Q9CZN7 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Shmt2Q9CZN7 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Shmt2Q9CZN7 Gm9870-201ENSMUST00000063874 645 ntBASIC18.88■□□□□ 0.61
Shmt2Q9CZN7 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Shmt2Q9CZN7 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Shmt2Q9CZN7 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Shmt2Q9CZN7 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Shmt2Q9CZN7 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Shmt2Q9CZN7 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Shmt2Q9CZN7 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
Shmt2Q9CZN7 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Shmt2Q9CZN7 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.87■□□□□ 0.61
Shmt2Q9CZN7 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Shmt2Q9CZN7 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
Shmt2Q9CZN7 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Shmt2Q9CZN7 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Shmt2Q9CZN7 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Shmt2Q9CZN7 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Shmt2Q9CZN7 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Shmt2Q9CZN7 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Shmt2Q9CZN7 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.86■□□□□ 0.61
Shmt2Q9CZN7 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Shmt2Q9CZN7 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Shmt2Q9CZN7 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Shmt2Q9CZN7 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Shmt2Q9CZN7 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Shmt2Q9CZN7 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Shmt2Q9CZN7 Gm12922-201ENSMUST00000120626 809 ntBASIC18.85■□□□□ 0.61
Shmt2Q9CZN7 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Shmt2Q9CZN7 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.85■□□□□ 0.61
Shmt2Q9CZN7 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Shmt2Q9CZN7 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Shmt2Q9CZN7 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Shmt2Q9CZN7 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Shmt2Q9CZN7 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Shmt2Q9CZN7 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Shmt2Q9CZN7 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Shmt2Q9CZN7 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Shmt2Q9CZN7 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Shmt2Q9CZN7 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Shmt2Q9CZN7 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Shmt2Q9CZN7 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Shmt2Q9CZN7 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.84■□□□□ 0.61
Shmt2Q9CZN7 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Shmt2Q9CZN7 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Shmt2Q9CZN7 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Shmt2Q9CZN7 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Shmt2Q9CZN7 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Shmt2Q9CZN7 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.83■□□□□ 0.6
Shmt2Q9CZN7 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
Shmt2Q9CZN7 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shmt2Q9CZN7 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shmt2Q9CZN7 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shmt2Q9CZN7 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Shmt2Q9CZN7 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shmt2Q9CZN7 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Shmt2Q9CZN7 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shmt2Q9CZN7 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Shmt2Q9CZN7 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shmt2Q9CZN7 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shmt2Q9CZN7 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shmt2Q9CZN7 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shmt2Q9CZN7 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shmt2Q9CZN7 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shmt2Q9CZN7 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shmt2Q9CZN7 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Shmt2Q9CZN7 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Shmt2Q9CZN7 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.81■□□□□ 0.6
Shmt2Q9CZN7 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Shmt2Q9CZN7 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.81■□□□□ 0.6
Shmt2Q9CZN7 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.81■□□□□ 0.6
Shmt2Q9CZN7 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.81■□□□□ 0.6
Shmt2Q9CZN7 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.81■□□□□ 0.6
Shmt2Q9CZN7 Gm9847-201ENSMUST00000052528 599 ntBASIC18.81■□□□□ 0.6
Shmt2Q9CZN7 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Shmt2Q9CZN7 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms