Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim13Q9CYB0 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim13Q9CYB0 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim13Q9CYB0 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trim13Q9CYB0 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim13Q9CYB0 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim13Q9CYB0 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Trim13Q9CYB0 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trim13Q9CYB0 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.28■□□□□ 0.52
Trim13Q9CYB0 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Trim13Q9CYB0 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim13Q9CYB0 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim13Q9CYB0 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim13Q9CYB0 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trim13Q9CYB0 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim13Q9CYB0 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim13Q9CYB0 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim13Q9CYB0 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Trim13Q9CYB0 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim13Q9CYB0 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trim13Q9CYB0 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Trim13Q9CYB0 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Trim13Q9CYB0 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim13Q9CYB0 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
Trim13Q9CYB0 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trim13Q9CYB0 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trim13Q9CYB0 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
Trim13Q9CYB0 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim13Q9CYB0 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim13Q9CYB0 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.26■□□□□ 0.51
Trim13Q9CYB0 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim13Q9CYB0 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trim13Q9CYB0 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Trim13Q9CYB0 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim13Q9CYB0 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim13Q9CYB0 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim13Q9CYB0 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Trim13Q9CYB0 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.25■□□□□ 0.51
Trim13Q9CYB0 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim13Q9CYB0 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim13Q9CYB0 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trim13Q9CYB0 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Trim13Q9CYB0 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim13Q9CYB0 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Trim13Q9CYB0 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trim13Q9CYB0 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.24■□□□□ 0.51
Trim13Q9CYB0 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim13Q9CYB0 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trim13Q9CYB0 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim13Q9CYB0 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim13Q9CYB0 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
Trim13Q9CYB0 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Trim13Q9CYB0 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Trim13Q9CYB0 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim13Q9CYB0 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim13Q9CYB0 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Trim13Q9CYB0 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.23■□□□□ 0.51
Trim13Q9CYB0 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim13Q9CYB0 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim13Q9CYB0 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim13Q9CYB0 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim13Q9CYB0 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim13Q9CYB0 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.22■□□□□ 0.51
Trim13Q9CYB0 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim13Q9CYB0 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim13Q9CYB0 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trim13Q9CYB0 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.22■□□□□ 0.51
Trim13Q9CYB0 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim13Q9CYB0 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim13Q9CYB0 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Trim13Q9CYB0 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim13Q9CYB0 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trim13Q9CYB0 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim13Q9CYB0 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim13Q9CYB0 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trim13Q9CYB0 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.2■□□□□ 0.5
Trim13Q9CYB0 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim13Q9CYB0 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim13Q9CYB0 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim13Q9CYB0 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.2■□□□□ 0.5
Trim13Q9CYB0 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Trim13Q9CYB0 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.2■□□□□ 0.5
Trim13Q9CYB0 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC18.2■□□□□ 0.5
Trim13Q9CYB0 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Trim13Q9CYB0 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim13Q9CYB0 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim13Q9CYB0 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim13Q9CYB0 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim13Q9CYB0 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim13Q9CYB0 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim13Q9CYB0 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.19■□□□□ 0.5
Trim13Q9CYB0 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim13Q9CYB0 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trim13Q9CYB0 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.19■□□□□ 0.5
Trim13Q9CYB0 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Trim13Q9CYB0 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
Trim13Q9CYB0 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim13Q9CYB0 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim13Q9CYB0 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim13Q9CYB0 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms