Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ssr1Q9CY50 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ssr1Q9CY50 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ssr1Q9CY50 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Ssr1Q9CY50 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ssr1Q9CY50 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ssr1Q9CY50 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ssr1Q9CY50 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ssr1Q9CY50 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.34■■□□□ 1.01
Ssr1Q9CY50 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ssr1Q9CY50 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ssr1Q9CY50 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ssr1Q9CY50 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC21.34■■□□□ 1.01
Ssr1Q9CY50 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ssr1Q9CY50 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ssr1Q9CY50 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ssr1Q9CY50 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ssr1Q9CY50 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.33■■□□□ 1.01
Ssr1Q9CY50 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Ssr1Q9CY50 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Ssr1Q9CY50 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ssr1Q9CY50 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
Ssr1Q9CY50 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ssr1Q9CY50 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC21.32■■□□□ 1
Ssr1Q9CY50 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ssr1Q9CY50 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.32■■□□□ 1
Ssr1Q9CY50 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.32■■□□□ 1
Ssr1Q9CY50 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.32■■□□□ 1
Ssr1Q9CY50 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ssr1Q9CY50 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ssr1Q9CY50 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Ssr1Q9CY50 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Ssr1Q9CY50 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Ssr1Q9CY50 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.31■■□□□ 1
Ssr1Q9CY50 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Ssr1Q9CY50 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Ssr1Q9CY50 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ssr1Q9CY50 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC21.3■■□□□ 1
Ssr1Q9CY50 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ssr1Q9CY50 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ssr1Q9CY50 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ssr1Q9CY50 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ssr1Q9CY50 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ssr1Q9CY50 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ssr1Q9CY50 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.3■■□□□ 1
Ssr1Q9CY50 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ssr1Q9CY50 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ssr1Q9CY50 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Ssr1Q9CY50 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ssr1Q9CY50 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ssr1Q9CY50 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ssr1Q9CY50 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ssr1Q9CY50 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ssr1Q9CY50 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ssr1Q9CY50 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ssr1Q9CY50 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ssr1Q9CY50 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ssr1Q9CY50 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ssr1Q9CY50 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ssr1Q9CY50 Gm7143-201ENSMUST00000222811 859 ntBASIC21.29■■□□□ 1
Ssr1Q9CY50 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ssr1Q9CY50 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ssr1Q9CY50 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Ssr1Q9CY50 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Ssr1Q9CY50 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ssr1Q9CY50 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ssr1Q9CY50 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Ssr1Q9CY50 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Ssr1Q9CY50 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Ssr1Q9CY50 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ssr1Q9CY50 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.28■■□□□ 1
Ssr1Q9CY50 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Ssr1Q9CY50 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ssr1Q9CY50 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ssr1Q9CY50 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ssr1Q9CY50 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ssr1Q9CY50 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ssr1Q9CY50 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ssr1Q9CY50 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ssr1Q9CY50 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ssr1Q9CY50 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Ssr1Q9CY50 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ssr1Q9CY50 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ssr1Q9CY50 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ssr1Q9CY50 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ssr1Q9CY50 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Ssr1Q9CY50 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC21.27■□□□□ 0.99
Ssr1Q9CY50 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Ssr1Q9CY50 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Ssr1Q9CY50 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC21.27■□□□□ 0.99
Ssr1Q9CY50 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ssr1Q9CY50 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.26■□□□□ 0.99
Ssr1Q9CY50 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ssr1Q9CY50 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ssr1Q9CY50 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ssr1Q9CY50 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Ssr1Q9CY50 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ssr1Q9CY50 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ssr1Q9CY50 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Ssr1Q9CY50 Gm15546-201ENSMUST00000122095 826 ntBASIC21.25■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms