Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb4Q91XZ6 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb4Q91XZ6 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb4Q91XZ6 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb4Q91XZ6 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb4Q91XZ6 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb4Q91XZ6 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb4Q91XZ6 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb4Q91XZ6 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb4Q91XZ6 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.62■□□□□ 0.73
Pcdhb4Q91XZ6 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb4Q91XZ6 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb4Q91XZ6 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Pcdhb4Q91XZ6 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Pcdhb4Q91XZ6 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb4Q91XZ6 Gm9870-201ENSMUST00000063874 645 ntBASIC19.62■□□□□ 0.73
Pcdhb4Q91XZ6 Gm9959-201ENSMUST00000068277 390 ntBASIC19.62■□□□□ 0.73
Pcdhb4Q91XZ6 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb4Q91XZ6 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb4Q91XZ6 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb4Q91XZ6 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb4Q91XZ6 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb4Q91XZ6 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Pcdhb4Q91XZ6 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.61■□□□□ 0.73
Pcdhb4Q91XZ6 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.61■□□□□ 0.73
Pcdhb4Q91XZ6 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb4Q91XZ6 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb4Q91XZ6 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Pcdhb4Q91XZ6 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb4Q91XZ6 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb4Q91XZ6 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb4Q91XZ6 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.6■□□□□ 0.73
Pcdhb4Q91XZ6 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.6■□□□□ 0.73
Pcdhb4Q91XZ6 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Pcdhb4Q91XZ6 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb4Q91XZ6 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb4Q91XZ6 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.6■□□□□ 0.73
Pcdhb4Q91XZ6 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb4Q91XZ6 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Pcdhb4Q91XZ6 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb4Q91XZ6 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb4Q91XZ6 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb4Q91XZ6 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Pcdhb4Q91XZ6 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb4Q91XZ6 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb4Q91XZ6 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb4Q91XZ6 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb4Q91XZ6 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb4Q91XZ6 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb4Q91XZ6 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb4Q91XZ6 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb4Q91XZ6 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb4Q91XZ6 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb4Q91XZ6 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Pcdhb4Q91XZ6 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb4Q91XZ6 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb4Q91XZ6 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.59■□□□□ 0.73
Pcdhb4Q91XZ6 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb4Q91XZ6 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Pcdhb4Q91XZ6 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdhb4Q91XZ6 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdhb4Q91XZ6 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdhb4Q91XZ6 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.58■□□□□ 0.73
Pcdhb4Q91XZ6 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.58■□□□□ 0.72
Pcdhb4Q91XZ6 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.58■□□□□ 0.72
Pcdhb4Q91XZ6 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhb4Q91XZ6 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhb4Q91XZ6 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhb4Q91XZ6 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhb4Q91XZ6 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Pcdhb4Q91XZ6 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhb4Q91XZ6 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Pcdhb4Q91XZ6 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhb4Q91XZ6 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhb4Q91XZ6 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
Pcdhb4Q91XZ6 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhb4Q91XZ6 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.57■□□□□ 0.72
Pcdhb4Q91XZ6 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Pcdhb4Q91XZ6 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhb4Q91XZ6 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Pcdhb4Q91XZ6 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb4Q91XZ6 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb4Q91XZ6 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.56■□□□□ 0.72
Pcdhb4Q91XZ6 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb4Q91XZ6 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb4Q91XZ6 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.56■□□□□ 0.72
Pcdhb4Q91XZ6 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb4Q91XZ6 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb4Q91XZ6 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb4Q91XZ6 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb4Q91XZ6 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb4Q91XZ6 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb4Q91XZ6 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
Pcdhb4Q91XZ6 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb4Q91XZ6 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb4Q91XZ6 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb4Q91XZ6 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb4Q91XZ6 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.55■□□□□ 0.72
Pcdhb4Q91XZ6 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb4Q91XZ6 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms