Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC29.48■■■□□ 2.31
RAPGEF4Q8WZA2 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC29.48■■■□□ 2.31
RAPGEF4Q8WZA2 NT5C3AP1-201ENST00000394500 1012 ntBASIC29.48■■■□□ 2.31
RAPGEF4Q8WZA2 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC29.48■■■□□ 2.31
RAPGEF4Q8WZA2 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC29.48■■■□□ 2.31
RAPGEF4Q8WZA2 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC29.48■■■□□ 2.31
RAPGEF4Q8WZA2 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
RAPGEF4Q8WZA2 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC29.48■■■□□ 2.31
RAPGEF4Q8WZA2 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
RAPGEF4Q8WZA2 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC29.47■■■□□ 2.31
RAPGEF4Q8WZA2 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC29.47■■■□□ 2.31
RAPGEF4Q8WZA2 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
RAPGEF4Q8WZA2 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC29.47■■■□□ 2.31
RAPGEF4Q8WZA2 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC29.47■■■□□ 2.31
RAPGEF4Q8WZA2 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC29.46■■■□□ 2.31
RAPGEF4Q8WZA2 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
RAPGEF4Q8WZA2 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC29.46■■■□□ 2.31
RAPGEF4Q8WZA2 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC29.46■■■□□ 2.31
RAPGEF4Q8WZA2 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
RAPGEF4Q8WZA2 AC105233.4-201ENST00000642045 216 ntBASIC29.46■■■□□ 2.31
RAPGEF4Q8WZA2 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC29.46■■■□□ 2.31
RAPGEF4Q8WZA2 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC29.45■■■□□ 2.31
RAPGEF4Q8WZA2 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC29.45■■■□□ 2.31
RAPGEF4Q8WZA2 AC138932.3-201ENST00000567634 1902 ntBASIC29.45■■■□□ 2.3
RAPGEF4Q8WZA2 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
RAPGEF4Q8WZA2 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
RAPGEF4Q8WZA2 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
RAPGEF4Q8WZA2 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
RAPGEF4Q8WZA2 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
RAPGEF4Q8WZA2 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
RAPGEF4Q8WZA2 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC29.44■■■□□ 2.3
RAPGEF4Q8WZA2 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC29.44■■■□□ 2.3
RAPGEF4Q8WZA2 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
RAPGEF4Q8WZA2 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC29.44■■■□□ 2.3
RAPGEF4Q8WZA2 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
RAPGEF4Q8WZA2 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
RAPGEF4Q8WZA2 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC29.44■■■□□ 2.3
RAPGEF4Q8WZA2 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
RAPGEF4Q8WZA2 STX4-202ENST00000394998 1498 ntTSL 2 BASIC29.43■■■□□ 2.3
RAPGEF4Q8WZA2 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
RAPGEF4Q8WZA2 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
RAPGEF4Q8WZA2 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC29.43■■■□□ 2.3
RAPGEF4Q8WZA2 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC29.43■■■□□ 2.3
RAPGEF4Q8WZA2 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC29.43■■■□□ 2.3
RAPGEF4Q8WZA2 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
RAPGEF4Q8WZA2 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC29.43■■■□□ 2.3
RAPGEF4Q8WZA2 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC29.43■■■□□ 2.3
RAPGEF4Q8WZA2 AC142381.3-201ENST00000568208 1670 ntBASIC29.43■■■□□ 2.3
RAPGEF4Q8WZA2 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
RAPGEF4Q8WZA2 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC29.42■■■□□ 2.3
RAPGEF4Q8WZA2 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC29.42■■■□□ 2.3
RAPGEF4Q8WZA2 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC29.42■■■□□ 2.3
RAPGEF4Q8WZA2 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
RAPGEF4Q8WZA2 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC29.41■■■□□ 2.3
RAPGEF4Q8WZA2 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
RAPGEF4Q8WZA2 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
RAPGEF4Q8WZA2 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
RAPGEF4Q8WZA2 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC29.41■■■□□ 2.3
RAPGEF4Q8WZA2 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC29.41■■■□□ 2.3
RAPGEF4Q8WZA2 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
RAPGEF4Q8WZA2 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
RAPGEF4Q8WZA2 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC29.4■■■□□ 2.3
RAPGEF4Q8WZA2 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
RAPGEF4Q8WZA2 VPS53-216ENST00000574029 585 ntTSL 4 BASIC29.4■■■□□ 2.3
RAPGEF4Q8WZA2 MED17-227ENST00000640521 2047 ntTSL 5 BASIC29.4■■■□□ 2.3
RAPGEF4Q8WZA2 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
RAPGEF4Q8WZA2 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC29.39■■■□□ 2.3
RAPGEF4Q8WZA2 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
RAPGEF4Q8WZA2 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
RAPGEF4Q8WZA2 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
RAPGEF4Q8WZA2 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC29.39■■■□□ 2.3
RAPGEF4Q8WZA2 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
RAPGEF4Q8WZA2 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
RAPGEF4Q8WZA2 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
RAPGEF4Q8WZA2 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC29.39■■■□□ 2.3
RAPGEF4Q8WZA2 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC29.39■■■□□ 2.3
RAPGEF4Q8WZA2 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC29.39■■■□□ 2.3
RAPGEF4Q8WZA2 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC29.39■■■□□ 2.3
RAPGEF4Q8WZA2 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC29.39■■■□□ 2.3
RAPGEF4Q8WZA2 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
RAPGEF4Q8WZA2 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC29.39■■■□□ 2.29
RAPGEF4Q8WZA2 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
RAPGEF4Q8WZA2 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC29.38■■■□□ 2.29
RAPGEF4Q8WZA2 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
RAPGEF4Q8WZA2 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC29.38■■■□□ 2.29
RAPGEF4Q8WZA2 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC29.38■■■□□ 2.29
RAPGEF4Q8WZA2 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC29.38■■■□□ 2.29
RAPGEF4Q8WZA2 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC29.37■■■□□ 2.29
RAPGEF4Q8WZA2 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC29.37■■■□□ 2.29
RAPGEF4Q8WZA2 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
RAPGEF4Q8WZA2 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC29.37■■■□□ 2.29
RAPGEF4Q8WZA2 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
RAPGEF4Q8WZA2 ME3-201ENST00000323418 1068 ntTSL 5 BASIC29.37■■■□□ 2.29
RAPGEF4Q8WZA2 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
RAPGEF4Q8WZA2 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC29.37■■■□□ 2.29
RAPGEF4Q8WZA2 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC29.37■■■□□ 2.29
RAPGEF4Q8WZA2 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
RAPGEF4Q8WZA2 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC29.37■■■□□ 2.29
RAPGEF4Q8WZA2 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
RAPGEF4Q8WZA2 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC29.36■■■□□ 2.29
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms