Protein–RNA interactions for Protein: Q8R429

Atp2a1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp2a1Q8R429 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Atp2a1Q8R429 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Atp2a1Q8R429 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Atp2a1Q8R429 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Atp2a1Q8R429 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
Atp2a1Q8R429 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Atp2a1Q8R429 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Atp2a1Q8R429 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Atp2a1Q8R429 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Atp2a1Q8R429 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Atp2a1Q8R429 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
Atp2a1Q8R429 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Atp2a1Q8R429 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Atp2a1Q8R429 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Atp2a1Q8R429 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Atp2a1Q8R429 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Atp2a1Q8R429 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Atp2a1Q8R429 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Atp2a1Q8R429 Gm10849-201ENSMUST00000100397 618 ntBASIC22.17■■□□□ 1.14
Atp2a1Q8R429 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC22.17■■□□□ 1.14
Atp2a1Q8R429 AC099934.2-201ENSMUST00000196389 70 ntBASIC22.17■■□□□ 1.14
Atp2a1Q8R429 AC156953.1-201ENSMUST00000196953 70 ntBASIC22.17■■□□□ 1.14
Atp2a1Q8R429 AC157822.2-201ENSMUST00000200291 70 ntBASIC22.17■■□□□ 1.14
Atp2a1Q8R429 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Atp2a1Q8R429 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Atp2a1Q8R429 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Atp2a1Q8R429 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Atp2a1Q8R429 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Atp2a1Q8R429 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC22.16■■□□□ 1.14
Atp2a1Q8R429 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Atp2a1Q8R429 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC22.16■■□□□ 1.14
Atp2a1Q8R429 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Atp2a1Q8R429 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Atp2a1Q8R429 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Atp2a1Q8R429 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Atp2a1Q8R429 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Atp2a1Q8R429 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Atp2a1Q8R429 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Atp2a1Q8R429 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Atp2a1Q8R429 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Atp2a1Q8R429 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Atp2a1Q8R429 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Atp2a1Q8R429 Gm26571-201ENSMUST00000181399 666 ntBASIC22.15■■□□□ 1.14
Atp2a1Q8R429 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Atp2a1Q8R429 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
Atp2a1Q8R429 Gm43006-201ENSMUST00000197702 1602 ntBASIC22.15■■□□□ 1.14
Atp2a1Q8R429 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Atp2a1Q8R429 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC22.14■■□□□ 1.14
Atp2a1Q8R429 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC22.14■■□□□ 1.14
Atp2a1Q8R429 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.14
Atp2a1Q8R429 Gm11421-201ENSMUST00000122124 294 ntBASIC22.14■■□□□ 1.13
Atp2a1Q8R429 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Atp2a1Q8R429 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC22.14■■□□□ 1.13
Atp2a1Q8R429 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC22.14■■□□□ 1.13
Atp2a1Q8R429 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
Atp2a1Q8R429 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Atp2a1Q8R429 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Atp2a1Q8R429 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Atp2a1Q8R429 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Atp2a1Q8R429 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Atp2a1Q8R429 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC22.13■■□□□ 1.13
Atp2a1Q8R429 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC22.13■■□□□ 1.13
Atp2a1Q8R429 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Atp2a1Q8R429 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Atp2a1Q8R429 Gm42642-201ENSMUST00000200683 355 ntBASIC22.13■■□□□ 1.13
Atp2a1Q8R429 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC22.12■■□□□ 1.13
Atp2a1Q8R429 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Atp2a1Q8R429 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Atp2a1Q8R429 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Atp2a1Q8R429 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Atp2a1Q8R429 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Atp2a1Q8R429 Gm7291-201ENSMUST00000199147 382 ntBASIC22.12■■□□□ 1.13
Atp2a1Q8R429 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
Atp2a1Q8R429 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
Atp2a1Q8R429 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Atp2a1Q8R429 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
Atp2a1Q8R429 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Atp2a1Q8R429 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Atp2a1Q8R429 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Atp2a1Q8R429 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC22.11■■□□□ 1.13
Atp2a1Q8R429 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC22.11■■□□□ 1.13
Atp2a1Q8R429 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
Atp2a1Q8R429 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Atp2a1Q8R429 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Atp2a1Q8R429 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Atp2a1Q8R429 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Atp2a1Q8R429 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Atp2a1Q8R429 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Atp2a1Q8R429 Gm27405-201ENSMUST00000184201 112 ntBASIC22.09■■□□□ 1.13
Atp2a1Q8R429 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
Atp2a1Q8R429 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Atp2a1Q8R429 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Atp2a1Q8R429 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Atp2a1Q8R429 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Atp2a1Q8R429 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Atp2a1Q8R429 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Atp2a1Q8R429 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Atp2a1Q8R429 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Atp2a1Q8R429 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
Atp2a1Q8R429 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms