Protein–RNA interactions for Protein: Q8K3P5

Cnot6, CCR4-NOT transcription complex subunit 6, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot6Q8K3P5 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cnot6Q8K3P5 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cnot6Q8K3P5 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cnot6Q8K3P5 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cnot6Q8K3P5 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cnot6Q8K3P5 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cnot6Q8K3P5 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Cnot6Q8K3P5 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cnot6Q8K3P5 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cnot6Q8K3P5 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cnot6Q8K3P5 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cnot6Q8K3P5 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cnot6Q8K3P5 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cnot6Q8K3P5 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.37■□□□□ 0.69
Cnot6Q8K3P5 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.37■□□□□ 0.69
Cnot6Q8K3P5 Gm40881-201ENSMUST00000223397 166 ntBASIC19.37■□□□□ 0.69
Cnot6Q8K3P5 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.37■□□□□ 0.69
Cnot6Q8K3P5 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cnot6Q8K3P5 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cnot6Q8K3P5 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cnot6Q8K3P5 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cnot6Q8K3P5 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Cnot6Q8K3P5 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Cnot6Q8K3P5 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cnot6Q8K3P5 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.36■□□□□ 0.69
Cnot6Q8K3P5 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
Cnot6Q8K3P5 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cnot6Q8K3P5 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cnot6Q8K3P5 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cnot6Q8K3P5 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cnot6Q8K3P5 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.36■□□□□ 0.69
Cnot6Q8K3P5 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cnot6Q8K3P5 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cnot6Q8K3P5 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cnot6Q8K3P5 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Cnot6Q8K3P5 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cnot6Q8K3P5 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cnot6Q8K3P5 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cnot6Q8K3P5 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cnot6Q8K3P5 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Cnot6Q8K3P5 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.35■□□□□ 0.69
Cnot6Q8K3P5 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cnot6Q8K3P5 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cnot6Q8K3P5 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.35■□□□□ 0.69
Cnot6Q8K3P5 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cnot6Q8K3P5 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cnot6Q8K3P5 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cnot6Q8K3P5 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cnot6Q8K3P5 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.34■□□□□ 0.69
Cnot6Q8K3P5 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.34■□□□□ 0.69
Cnot6Q8K3P5 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cnot6Q8K3P5 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cnot6Q8K3P5 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Cnot6Q8K3P5 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cnot6Q8K3P5 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cnot6Q8K3P5 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cnot6Q8K3P5 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.33■□□□□ 0.68
Cnot6Q8K3P5 Gm9959-201ENSMUST00000068277 390 ntBASIC19.33■□□□□ 0.68
Cnot6Q8K3P5 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.33■□□□□ 0.68
Cnot6Q8K3P5 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cnot6Q8K3P5 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cnot6Q8K3P5 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.32■□□□□ 0.68
Cnot6Q8K3P5 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
Cnot6Q8K3P5 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cnot6Q8K3P5 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cnot6Q8K3P5 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cnot6Q8K3P5 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cnot6Q8K3P5 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cnot6Q8K3P5 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cnot6Q8K3P5 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cnot6Q8K3P5 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Cnot6Q8K3P5 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Cnot6Q8K3P5 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cnot6Q8K3P5 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cnot6Q8K3P5 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cnot6Q8K3P5 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Cnot6Q8K3P5 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cnot6Q8K3P5 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Cnot6Q8K3P5 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.31■□□□□ 0.68
Cnot6Q8K3P5 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cnot6Q8K3P5 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.31■□□□□ 0.68
Cnot6Q8K3P5 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cnot6Q8K3P5 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cnot6Q8K3P5 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Cnot6Q8K3P5 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.31■□□□□ 0.68
Cnot6Q8K3P5 Golph3-205ENSMUST00000228671 2842 ntBASIC19.3■□□□□ 0.68
Cnot6Q8K3P5 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cnot6Q8K3P5 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cnot6Q8K3P5 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.3■□□□□ 0.68
Cnot6Q8K3P5 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cnot6Q8K3P5 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cnot6Q8K3P5 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cnot6Q8K3P5 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cnot6Q8K3P5 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cnot6Q8K3P5 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cnot6Q8K3P5 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cnot6Q8K3P5 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cnot6Q8K3P5 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cnot6Q8K3P5 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cnot6Q8K3P5 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms