Protein–RNA interactions for Protein: Q8CIG0

Depdc1a, DEP domain-containing protein 1A, mousemouse

Predictions only

Length 804 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1aQ8CIG0 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Depdc1aQ8CIG0 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC22.51■■□□□ 1.19
Depdc1aQ8CIG0 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Depdc1aQ8CIG0 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
Depdc1aQ8CIG0 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
Depdc1aQ8CIG0 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC22.51■■□□□ 1.19
Depdc1aQ8CIG0 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC22.51■■□□□ 1.19
Depdc1aQ8CIG0 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Depdc1aQ8CIG0 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC22.51■■□□□ 1.19
Depdc1aQ8CIG0 Gm10129-202ENSMUST00000193100 1316 ntBASIC22.51■■□□□ 1.19
Depdc1aQ8CIG0 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Depdc1aQ8CIG0 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC22.51■■□□□ 1.19
Depdc1aQ8CIG0 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Depdc1aQ8CIG0 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
Depdc1aQ8CIG0 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
Depdc1aQ8CIG0 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Depdc1aQ8CIG0 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
Depdc1aQ8CIG0 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Depdc1aQ8CIG0 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC22.49■■□□□ 1.19
Depdc1aQ8CIG0 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Depdc1aQ8CIG0 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Depdc1aQ8CIG0 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Depdc1aQ8CIG0 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Depdc1aQ8CIG0 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Depdc1aQ8CIG0 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Depdc1aQ8CIG0 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Depdc1aQ8CIG0 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Depdc1aQ8CIG0 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
Depdc1aQ8CIG0 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Depdc1aQ8CIG0 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC22.48■■□□□ 1.19
Depdc1aQ8CIG0 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Depdc1aQ8CIG0 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
Depdc1aQ8CIG0 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC22.47■■□□□ 1.19
Depdc1aQ8CIG0 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Depdc1aQ8CIG0 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Depdc1aQ8CIG0 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Depdc1aQ8CIG0 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Depdc1aQ8CIG0 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Depdc1aQ8CIG0 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Depdc1aQ8CIG0 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Depdc1aQ8CIG0 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Depdc1aQ8CIG0 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Depdc1aQ8CIG0 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
Depdc1aQ8CIG0 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC22.46■■□□□ 1.19
Depdc1aQ8CIG0 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
Depdc1aQ8CIG0 Slc35b2-207ENSMUST00000226086 850 ntBASIC22.46■■□□□ 1.19
Depdc1aQ8CIG0 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Depdc1aQ8CIG0 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Depdc1aQ8CIG0 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Depdc1aQ8CIG0 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Depdc1aQ8CIG0 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Depdc1aQ8CIG0 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
Depdc1aQ8CIG0 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Depdc1aQ8CIG0 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC22.46■■□□□ 1.19
Depdc1aQ8CIG0 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Depdc1aQ8CIG0 AC099934.2-201ENSMUST00000196389 70 ntBASIC22.45■■□□□ 1.18
Depdc1aQ8CIG0 AC156953.1-201ENSMUST00000196953 70 ntBASIC22.45■■□□□ 1.18
Depdc1aQ8CIG0 AC157822.2-201ENSMUST00000200291 70 ntBASIC22.45■■□□□ 1.18
Depdc1aQ8CIG0 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Depdc1aQ8CIG0 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Depdc1aQ8CIG0 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC22.45■■□□□ 1.18
Depdc1aQ8CIG0 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC22.44■■□□□ 1.18
Depdc1aQ8CIG0 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Depdc1aQ8CIG0 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC22.44■■□□□ 1.18
Depdc1aQ8CIG0 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Depdc1aQ8CIG0 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Depdc1aQ8CIG0 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Depdc1aQ8CIG0 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Depdc1aQ8CIG0 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Depdc1aQ8CIG0 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Depdc1aQ8CIG0 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Depdc1aQ8CIG0 Gm10571-201ENSMUST00000097869 1638 ntBASIC22.42■■□□□ 1.18
Depdc1aQ8CIG0 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
Depdc1aQ8CIG0 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Depdc1aQ8CIG0 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC22.42■■□□□ 1.18
Depdc1aQ8CIG0 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Depdc1aQ8CIG0 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC22.42■■□□□ 1.18
Depdc1aQ8CIG0 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
Depdc1aQ8CIG0 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Depdc1aQ8CIG0 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Depdc1aQ8CIG0 Gm15043-201ENSMUST00000118843 1543 ntBASIC22.41■■□□□ 1.18
Depdc1aQ8CIG0 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Depdc1aQ8CIG0 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Depdc1aQ8CIG0 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Depdc1aQ8CIG0 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC22.41■■□□□ 1.18
Depdc1aQ8CIG0 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC22.41■■□□□ 1.18
Depdc1aQ8CIG0 Cdkn3-203ENSMUST00000227149 1952 ntBASIC22.41■■□□□ 1.18
Depdc1aQ8CIG0 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Depdc1aQ8CIG0 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC22.41■■□□□ 1.18
Depdc1aQ8CIG0 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Depdc1aQ8CIG0 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Depdc1aQ8CIG0 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
Depdc1aQ8CIG0 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Depdc1aQ8CIG0 Gm26571-201ENSMUST00000181399 666 ntBASIC22.4■■□□□ 1.18
Depdc1aQ8CIG0 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Depdc1aQ8CIG0 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Depdc1aQ8CIG0 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Depdc1aQ8CIG0 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Depdc1aQ8CIG0 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Depdc1aQ8CIG0 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC22.39■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms