Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smim4Q8C1Q6 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smim4Q8C1Q6 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smim4Q8C1Q6 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smim4Q8C1Q6 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smim4Q8C1Q6 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smim4Q8C1Q6 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smim4Q8C1Q6 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smim4Q8C1Q6 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smim4Q8C1Q6 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smim4Q8C1Q6 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC16.57■□□□□ 0.24
Smim4Q8C1Q6 Gm42501-201ENSMUST00000200220 1026 ntBASIC16.57■□□□□ 0.24
Smim4Q8C1Q6 Gm15820-201ENSMUST00000201566 728 ntBASIC16.57■□□□□ 0.24
Smim4Q8C1Q6 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smim4Q8C1Q6 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Smim4Q8C1Q6 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.57■□□□□ 0.24
Smim4Q8C1Q6 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smim4Q8C1Q6 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Smim4Q8C1Q6 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smim4Q8C1Q6 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Smim4Q8C1Q6 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Smim4Q8C1Q6 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Smim4Q8C1Q6 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smim4Q8C1Q6 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smim4Q8C1Q6 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Smim4Q8C1Q6 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC16.56■□□□□ 0.24
Smim4Q8C1Q6 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smim4Q8C1Q6 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC16.55■□□□□ 0.24
Smim4Q8C1Q6 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Smim4Q8C1Q6 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC16.55■□□□□ 0.24
Smim4Q8C1Q6 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.55■□□□□ 0.24
Smim4Q8C1Q6 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Smim4Q8C1Q6 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Smim4Q8C1Q6 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC16.55■□□□□ 0.24
Smim4Q8C1Q6 Mir6236-201ENSMUST00000184437 123 ntBASIC16.55■□□□□ 0.24
Smim4Q8C1Q6 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Smim4Q8C1Q6 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Smim4Q8C1Q6 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Smim4Q8C1Q6 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Smim4Q8C1Q6 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC16.55■□□□□ 0.24
Smim4Q8C1Q6 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Smim4Q8C1Q6 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Smim4Q8C1Q6 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smim4Q8C1Q6 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smim4Q8C1Q6 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smim4Q8C1Q6 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Smim4Q8C1Q6 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Smim4Q8C1Q6 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smim4Q8C1Q6 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smim4Q8C1Q6 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Smim4Q8C1Q6 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smim4Q8C1Q6 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC16.54■□□□□ 0.24
Smim4Q8C1Q6 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC16.54■□□□□ 0.24
Smim4Q8C1Q6 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC16.54■□□□□ 0.24
Smim4Q8C1Q6 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smim4Q8C1Q6 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC16.54■□□□□ 0.24
Smim4Q8C1Q6 Iqck-206ENSMUST00000208658 2891 ntBASIC16.54■□□□□ 0.24
Smim4Q8C1Q6 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smim4Q8C1Q6 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
Smim4Q8C1Q6 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Smim4Q8C1Q6 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Smim4Q8C1Q6 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smim4Q8C1Q6 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smim4Q8C1Q6 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Smim4Q8C1Q6 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smim4Q8C1Q6 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smim4Q8C1Q6 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smim4Q8C1Q6 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Smim4Q8C1Q6 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smim4Q8C1Q6 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smim4Q8C1Q6 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smim4Q8C1Q6 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Smim4Q8C1Q6 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smim4Q8C1Q6 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC16.52■□□□□ 0.24
Smim4Q8C1Q6 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Smim4Q8C1Q6 Gm7417-201ENSMUST00000192950 473 ntBASIC16.52■□□□□ 0.24
Smim4Q8C1Q6 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smim4Q8C1Q6 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Smim4Q8C1Q6 Gm9870-201ENSMUST00000063874 645 ntBASIC16.52■□□□□ 0.24
Smim4Q8C1Q6 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC16.52■□□□□ 0.24
Smim4Q8C1Q6 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Smim4Q8C1Q6 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Smim4Q8C1Q6 Gm43909-201ENSMUST00000203443 1876 ntBASIC16.52■□□□□ 0.23
Smim4Q8C1Q6 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Smim4Q8C1Q6 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Smim4Q8C1Q6 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Smim4Q8C1Q6 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Smim4Q8C1Q6 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Smim4Q8C1Q6 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Smim4Q8C1Q6 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Smim4Q8C1Q6 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Smim4Q8C1Q6 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Smim4Q8C1Q6 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Smim4Q8C1Q6 Gm5522-201ENSMUST00000189483 1242 ntBASIC16.51■□□□□ 0.23
Smim4Q8C1Q6 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC16.51■□□□□ 0.23
Smim4Q8C1Q6 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smim4Q8C1Q6 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smim4Q8C1Q6 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smim4Q8C1Q6 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smim4Q8C1Q6 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms