Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
Col16a1Q8BLX7 Gm10571-201ENSMUST00000097869 1638 ntBASIC26.56■■□□□ 1.84
Col16a1Q8BLX7 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC26.56■■□□□ 1.84
Col16a1Q8BLX7 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC26.56■■□□□ 1.84
Col16a1Q8BLX7 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Col16a1Q8BLX7 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Col16a1Q8BLX7 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Col16a1Q8BLX7 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
Col16a1Q8BLX7 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
Col16a1Q8BLX7 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Col16a1Q8BLX7 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Col16a1Q8BLX7 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Col16a1Q8BLX7 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Col16a1Q8BLX7 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Col16a1Q8BLX7 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC26.54■■□□□ 1.84
Col16a1Q8BLX7 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Col16a1Q8BLX7 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC26.54■■□□□ 1.84
Col16a1Q8BLX7 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Col16a1Q8BLX7 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC26.54■■□□□ 1.84
Col16a1Q8BLX7 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC26.54■■□□□ 1.84
Col16a1Q8BLX7 Gm13148-201ENSMUST00000118892 745 ntBASIC26.54■■□□□ 1.84
Col16a1Q8BLX7 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
Col16a1Q8BLX7 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Col16a1Q8BLX7 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
Col16a1Q8BLX7 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Col16a1Q8BLX7 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Col16a1Q8BLX7 CT030146.1-201ENSMUST00000220919 217 ntBASIC26.52■■□□□ 1.84
Col16a1Q8BLX7 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Col16a1Q8BLX7 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.84
Col16a1Q8BLX7 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Col16a1Q8BLX7 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Col16a1Q8BLX7 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC26.51■■□□□ 1.84
Col16a1Q8BLX7 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
Col16a1Q8BLX7 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Col16a1Q8BLX7 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Col16a1Q8BLX7 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC26.51■■□□□ 1.83
Col16a1Q8BLX7 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Col16a1Q8BLX7 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC26.5■■□□□ 1.83
Col16a1Q8BLX7 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC26.49■■□□□ 1.83
Col16a1Q8BLX7 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC26.49■■□□□ 1.83
Col16a1Q8BLX7 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Col16a1Q8BLX7 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Col16a1Q8BLX7 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
Col16a1Q8BLX7 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
Col16a1Q8BLX7 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC26.48■■□□□ 1.83
Col16a1Q8BLX7 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC26.48■■□□□ 1.83
Col16a1Q8BLX7 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Col16a1Q8BLX7 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Col16a1Q8BLX7 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Col16a1Q8BLX7 Gm10252-201ENSMUST00000209541 832 ntBASIC26.48■■□□□ 1.83
Col16a1Q8BLX7 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Col16a1Q8BLX7 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC26.48■■□□□ 1.83
Col16a1Q8BLX7 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Col16a1Q8BLX7 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC26.47■■□□□ 1.83
Col16a1Q8BLX7 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Col16a1Q8BLX7 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Col16a1Q8BLX7 Gm20760-201ENSMUST00000179197 648 ntBASIC26.46■■□□□ 1.83
Col16a1Q8BLX7 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC26.46■■□□□ 1.83
Col16a1Q8BLX7 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
Col16a1Q8BLX7 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC26.46■■□□□ 1.83
Col16a1Q8BLX7 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
Col16a1Q8BLX7 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC26.46■■□□□ 1.83
Col16a1Q8BLX7 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Col16a1Q8BLX7 Gm13146-201ENSMUST00000118508 780 ntBASIC26.46■■□□□ 1.83
Col16a1Q8BLX7 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC26.46■■□□□ 1.83
Col16a1Q8BLX7 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Col16a1Q8BLX7 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC26.45■■□□□ 1.82
Col16a1Q8BLX7 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Col16a1Q8BLX7 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Col16a1Q8BLX7 Gm43859-201ENSMUST00000200075 1412 ntBASIC26.44■■□□□ 1.82
Col16a1Q8BLX7 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Col16a1Q8BLX7 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC26.44■■□□□ 1.82
Col16a1Q8BLX7 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Col16a1Q8BLX7 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC26.43■■□□□ 1.82
Col16a1Q8BLX7 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC26.43■■□□□ 1.82
Col16a1Q8BLX7 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Col16a1Q8BLX7 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Col16a1Q8BLX7 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Col16a1Q8BLX7 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC26.42■■□□□ 1.82
Col16a1Q8BLX7 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Col16a1Q8BLX7 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Col16a1Q8BLX7 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
Col16a1Q8BLX7 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Col16a1Q8BLX7 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Col16a1Q8BLX7 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Col16a1Q8BLX7 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Col16a1Q8BLX7 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
Col16a1Q8BLX7 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Col16a1Q8BLX7 Gm22240-201ENSMUST00000175225 82 ntBASIC26.41■■□□□ 1.82
Col16a1Q8BLX7 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Col16a1Q8BLX7 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC26.4■■□□□ 1.82
Col16a1Q8BLX7 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
Col16a1Q8BLX7 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Col16a1Q8BLX7 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Col16a1Q8BLX7 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Col16a1Q8BLX7 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Col16a1Q8BLX7 CT010467.1-202ENSMUST00000205406 714 ntBASIC26.38■■□□□ 1.81
Col16a1Q8BLX7 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC26.38■■□□□ 1.81
Col16a1Q8BLX7 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Col16a1Q8BLX7 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC26.38■■□□□ 1.81
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms